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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106437563   polypyrimidine tract-binding protein homolog 2 
 ath-u.5   PTB2   polypyrimidine tract-binding protein 2 
 gma-u.5   100819659   polypyrimidine tract-binding protein homolog 2 
 gma-u.5   100813651   polypyrimidine tract-binding protein homolog 2-like 
 gma-u.5   100778533   polypyrimidine tract-binding protein homolog 2 
 ppo-u.5   112323233   polypyrimidine tract-binding protein homolog 2 
 ppo-u.5   7453843   polypyrimidine tract-binding protein homolog 2 
 mtr-u.5   25482365   polypyrimidine tract-binding protein homolog 2 
 mtr-u.5   11425189   polypyrimidine tract-binding protein homolog 2 
 sly-u.5   101251752   polypyrimidine tract-binding protein homolog 2 
 osa-u.5   4326619   polypyrimidine tract-binding protein homolog 1 
 zma-u.5   103651483   polypyrimidine tract-binding protein homolog 1 

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Top 50 coexpressed genes to 106437563 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106437563 (bna-r.1 coexpression data)

CoexMap"106437563"


bnaLOC106437563 | Entrez gene ID : 106437563    
Species bna ath gma ppo mtr sly osa zma cre ghi cit vvi hvu bdi sot bra sbi tae nta
Paralog 1 1 3 2 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0043484 [list] [network] regulation of RNA splicing  (83 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (918 genes)  IEA  
Protein XP_013733923.2 [sequence] [blastp]
XP_013733924.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 4  (predict for XP_013733923.2)
chlo 6,  cyto 1,  mito 1,  extr 1,  vacu 1,  E.R. 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for XP_013733924.2)
Subcellular
localization
TargetP
mito 4,  other 3  (predict for XP_013733923.2)
mito 6,  scret 3  (predict for XP_013733924.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106437563

.
ath-u.5
for
PTB2

.
gma-u.5
for
100819659

.
gma-u.5
for
100813651

.
gma-u.5
for
100778533

.
ppo-u.5
for
112323233

.
ppo-u.5
for
7453843

.
mtr-u.5
for
25482365

.
mtr-u.5
for
11425189

.
sly-u.5
for
101251752

.
osa-u.5
for
4326619

.
zma-u.5
for
103651483

.


Ortholog ID: 6995
Species ath gma gma sly osa zma bra ppo ppo mtr mtr tae tae hvu ghi ghi bna bna sbi sot sot cit bdi nta nta
Symbol PTB2 LOC100778533 LOC100813651 LOC101251752 LOC4326619 LOC103651483 LOC103857097 LOC7453843 LOC112323233 LOC25482365 LOC11425189 LOC123061506 LOC123070150 LOC123443897 LOC107917923 LOC107945949 LOC106437509 LOC106437563 LOC8084839 LOC102602437 LOC102585056 LOC102607906 LOC100846907 LOC107830289 LOC107804511
Function* polypyrimidine tract-binding protein 2 polypyrimidine tract-binding protein homolog 2 polypyrimidine tract-binding protein homolog 2-like polypyrimidine tract-binding protein homolog 2 polypyrimidine tract-binding protein homolog 1 polypyrimidine tract-binding protein homolog 1 polypyrimidine tract-binding protein homolog 2 polypyrimidine tract-binding protein homolog 2 polypyrimidine tract-binding protein homolog 2 polypyrimidine tract-binding protein homolog 2 polypyrimidine tract-binding protein homolog 2 polypyrimidine tract-binding protein homolog 1 polypyrimidine tract-binding protein homolog 1 polypyrimidine tract-binding protein homolog 1-like polypyrimidine tract-binding protein homolog 2 polypyrimidine tract-binding protein homolog 2 polypyrimidine tract-binding protein homolog 2 polypyrimidine tract-binding protein homolog 2 polypyrimidine tract-binding protein homolog 1 polypyrimidine tract-binding protein homolog 2 polypyrimidine tract-binding protein homolog 2 polypyrimidine tract-binding protein homolog 2 polypyrimidine tract-binding protein homolog 1 polypyrimidine tract-binding protein homolog 2 polypyrimidine tract-binding protein homolog 2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 2
gma04145 Phagosome 2
gma00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 3
sly03013 Nucleocytoplasmic transport 2
sly03015 mRNA surveillance pathway 2
sly03040 Spliceosome 2
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 3
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 5
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 2
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 4
sbi03022 Basal transcription factors 2
sbi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835399 100778533 100813651 101251752 4326619 103651483 103857097 7453843 112323233 25482365 11425189 123061506 123070150 123443897 107917923 107945949 106437509 106437563 8084839 102602437 102585056 102607906 100846907 107830289 107804511
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