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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103857949   pentatricopeptide repeat-containing protein At2g40720 
 ath-u.5   AT2G40720   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ghi-r.1   107904442   pentatricopeptide repeat-containing protein At2g40720 
 ghi-r.1   107904742   pentatricopeptide repeat-containing protein At2g40720 
 vvi-u.5   100241644   pentatricopeptide repeat-containing protein At2g40720 
 sly-u.5   101252089   pentatricopeptide repeat-containing protein At2g40720 
 sot-r.1   102578691   pentatricopeptide repeat-containing protein At2g40720 
 nta-r.1   107779867   pentatricopeptide repeat-containing protein At2g40720-like 
 nta-r.1   107825206   pentatricopeptide repeat-containing protein At2g40720-like 

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Top 50 coexpressed genes to 103857949 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103857949 (bra-r.6 coexpression data)

CoexMap"106438016"


bnaLOC106438016 | Entrez gene ID : 106438016    
Species bra ath ghi vvi sly sot nta osa bdi cit tae ppo zma mtr hvu sbi cre gma bna
Paralog 1 1 2 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (870 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (3852 genes)  IEA  
GO:0005515 [list] [network] protein binding  (12789 genes)  IEA  
Protein XP_013734503.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  E.R. 2,  mito 1,  E.R._vacu 1,  nucl 1,  cysk_nucl 1,  E.R._plas 1,  cyto_E.R. 1  (predict for XP_013734503.2)
Subcellular
localization
TargetP
mito 5,  other 3  (predict for XP_013734503.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103857949
ath-u.5
for
AT2G40720
ghi-r.1
for
107904442
ghi-r.1
for
107904742
vvi-u.5
for
100241644
sly-u.5
for
101252089
sot-r.1
for
102578691
nta-r.1
for
107779867
nta-r.1
for
107825206


Ortholog ID: 14350
Species bra ath ghi ghi vvi sly sot nta nta
Symbol LOC103857949 AT2G40720 LOC107904442 LOC107904742 LOC100241644 LOC101252089 LOC102578691 LOC107779867 LOC107825206
Function* pentatricopeptide repeat-containing protein At2g40720 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At2g40720 pentatricopeptide repeat-containing protein At2g40720 pentatricopeptide repeat-containing protein At2g40720 pentatricopeptide repeat-containing protein At2g40720 pentatricopeptide repeat-containing protein At2g40720 pentatricopeptide repeat-containing protein At2g40720-like pentatricopeptide repeat-containing protein At2g40720-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 6
ghi00520 Amino sugar and nucleotide sugar metabolism 5
ghi01250 Biosynthesis of nucleotide sugars 5
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00760 Nicotinate and nicotinamide metabolism 2
nta01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103857949 818667 107904442 107904742 100241644 101252089 102578691 107779867 107825206
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