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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106439347   polyadenylate-binding protein-interacting protein 4 
 bna-r.1   106377559   polyadenylate-binding protein-interacting protein 4 
 bna-r.1   106345832   polyadenylate-binding protein-interacting protein 3 
 bra-r.6   103871067   polyadenylate-binding protein-interacting protein 3 
 bra-r.6   103842374   polyadenylate-binding protein-interacting protein 4 
 ath-u.5   CID4   CTC-interacting domain 4 
 ath-u.5   CID3   CTC-interacting domain 3 
 ghi-r.1   107931600   polyadenylate-binding protein-interacting protein 3 
 ghi-r.1   107960300   polyadenylate-binding protein-interacting protein 3 
 ghi-r.1   121230838   polyadenylate-binding protein-interacting protein 3 
 cit-r.1   102610113   polyadenylate-binding protein-interacting protein 3 
 gma-u.5   100812754   polyadenylate-binding protein-interacting protein 3 
 gma-u.5   100796073   polyadenylate-binding protein-interacting protein 4 
 gma-u.5   100782491   polyadenylate-binding protein-interacting protein 3 
 vvi-u.5   100265239   polyadenylate-binding protein-interacting protein 4 
 ppo-u.5   7478359   polyadenylate-binding protein-interacting protein 3 
 ppo-u.5   7478112   polyadenylate-binding protein-interacting protein 3 
 mtr-u.5   11435252   polyadenylate-binding protein-interacting protein 3 
 mtr-u.5   25500533   polyadenylate-binding protein-interacting protein 3 
 sly-u.5   101261127   polyadenylate-binding protein-interacting protein 4 
 sly-u.5   101259622   polyadenylate-binding protein-interacting protein 4 
 sot-r.1   102606381   polyadenylate-binding protein-interacting protein 4-like 
 sot-r.1   102592714   polyadenylate-binding protein-interacting protein 4-like 
 nta-r.1   107799444   polyadenylate-binding protein-interacting protein 4-like 
 nta-r.1   107785908   polyadenylate-binding protein-interacting protein 4 
 nta-r.1   107813901   polyadenylate-binding protein-interacting protein 4 
 osa-u.5   4329365   polyadenylate-binding protein-interacting protein 4 
 zma-u.5   103654662   polyadenylate-binding protein-interacting protein 4 
 zma-u.5   100502245   Polyadenylate-binding protein-interacting protein 3 
 tae-r.2   123135444   polyadenylate-binding protein-interacting protein 4 
 tae-r.2   123131655   polyadenylate-binding protein-interacting protein 4 
 tae-r.2   123129293   polyadenylate-binding protein-interacting protein 3-like 
 hvu-r.1   123401219   polyadenylate-binding protein-interacting protein 4-like 
 sbi-r.1   8084530   polyadenylate-binding protein-interacting protein 4 
 bdi-r.1   100820969   polyadenylate-binding protein-interacting protein 4 
 cre-r.1   CHLRE_01g063997v5   uncharacterized protein 

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Top 50 coexpressed genes to 106439347 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106439347 (bna-r.1 coexpression data)

CoexMap"106439347"


bnaLOC106439347 | Entrez gene ID : 106439347    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 2 2 3 1 3 1 2 2 2 2 3 1 2 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0034063 [list] [network] stress granule assembly  (34 genes)  IEA  
GO CC
GO:0010494 [list] [network] cytoplasmic stress granule  (42 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (3852 genes)  IEA  
Protein XP_013736218.2 [sequence] [blastp]
XP_013736219.2 [sequence] [blastp]
XP_013736226.2 [sequence] [blastp]
XP_048632376.1 [sequence] [blastp]
XP_048632377.1 [sequence] [blastp]
XP_048632378.1 [sequence] [blastp]
XP_048632379.1 [sequence] [blastp]
XP_048632380.1 [sequence] [blastp]
XP_048632381.1 [sequence] [blastp]
XP_048632382.1 [sequence] [blastp]
XP_048632383.1 [sequence] [blastp]
XP_048632384.1 [sequence] [blastp]
XP_048632385.1 [sequence] [blastp]
XP_048632386.1 [sequence] [blastp]
XP_048632387.1 [sequence] [blastp]
XP_048632388.1 [sequence] [blastp]
XP_048632389.1 [sequence] [blastp]
XP_048632390.1 [sequence] [blastp]
XP_048632391.1 [sequence] [blastp]
XP_048632392.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_013736218.2)
nucl 9  (predict for XP_013736219.2)
nucl 10  (predict for XP_013736226.2)
nucl 9  (predict for XP_048632376.1)
nucl 9  (predict for XP_048632377.1)
nucl 9  (predict for XP_048632378.1)
nucl 9  (predict for XP_048632379.1)
nucl 10  (predict for XP_048632380.1)
nucl 10  (predict for XP_048632381.1)
nucl 10  (predict for XP_048632382.1)
nucl 9  (predict for XP_048632383.1)
nucl 9  (predict for XP_048632384.1)
nucl 9  (predict for XP_048632385.1)
nucl 9  (predict for XP_048632386.1)
nucl 10  (predict for XP_048632387.1)
nucl 9  (predict for XP_048632388.1)
nucl 9  (predict for XP_048632389.1)
nucl 9  (predict for XP_048632390.1)
nucl 9  (predict for XP_048632391.1)
nucl 9  (predict for XP_048632392.1)
Subcellular
localization
TargetP
other 4  (predict for XP_013736218.2)
other 4  (predict for XP_013736219.2)
other 7,  mito 5  (predict for XP_013736226.2)
other 8,  mito 3  (predict for XP_048632376.1)
other 8,  mito 3  (predict for XP_048632377.1)
other 8,  mito 3  (predict for XP_048632378.1)
other 8,  mito 3  (predict for XP_048632379.1)
other 4,  chlo 4  (predict for XP_048632380.1)
other 4,  chlo 4  (predict for XP_048632381.1)
other 4,  chlo 4  (predict for XP_048632382.1)
other 8,  mito 3  (predict for XP_048632383.1)
other 5  (predict for XP_048632384.1)
other 5  (predict for XP_048632385.1)
other 5  (predict for XP_048632386.1)
other 8,  mito 3  (predict for XP_048632387.1)
other 8  (predict for XP_048632388.1)
other 4  (predict for XP_048632389.1)
other 4  (predict for XP_048632390.1)
other 7,  mito 5  (predict for XP_048632391.1)
other 7,  mito 5  (predict for XP_048632392.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106439347
bna-r.1
for
106377559
bna-r.1
for
106345832
bra-r.6
for
103871067
bra-r.6
for
103842374
ath-u.5
for
CID4
ath-u.5
for
CID3
ghi-r.1
for
107931600
ghi-r.1
for
107960300
ghi-r.1
for
121230838
cit-r.1
for
102610113
gma-u.5
for
100812754
gma-u.5
for
100796073
gma-u.5
for
100782491
vvi-u.5
for
100265239
ppo-u.5
for
7478359
ppo-u.5
for
7478112
mtr-u.5
for
11435252
mtr-u.5
for
25500533
sly-u.5
for
101261127
sly-u.5
for
101259622
sot-r.1
for
102606381
sot-r.1
for
102592714
nta-r.1
for
107799444
nta-r.1
for
107785908
nta-r.1
for
107813901
osa-u.5
for
4329365
zma-u.5
for
103654662
zma-u.5
for
100502245
tae-r.2
for
123135444
tae-r.2
for
123131655
tae-r.2
for
123129293
hvu-r.1
for
123401219
sbi-r.1
for
8084530
bdi-r.1
for
100820969
cre-r.1
for
CHLRE_01g063997v5


Ortholog ID: 3801
Species bna bna bra bra ath ath ghi ghi ghi cit gma gma gma vvi ppo ppo mtr mtr sly sly sot sot nta nta nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol LOC106348628 LOC125609479 LOC103871067 LOC103842374 CID4 CID3 LOC107931600 LOC107904324 LOC107914026 LOC102610113 LOC100796073 LOC100782491 LOC100778053 LOC100265239 LOC7478359 LOC7478112 LOC11435252 LOC25500533 LOC101261127 LOC101259622 LOC102606381 LOC102592714 LOC107799444 LOC107785908 LOC107813901 LOC4329365 LOC103654662 LOC100502245 LOC123131655 LOC123143038 LOC123129971 LOC123401219 LOC8084530 LOC100820969 CHLRE_01g063997v5
Function* polyadenylate-binding protein-interacting protein 4 polyadenylate-binding protein-interacting protein 3-like polyadenylate-binding protein-interacting protein 3 polyadenylate-binding protein-interacting protein 4 CTC-interacting domain 4 CTC-interacting domain 3 polyadenylate-binding protein-interacting protein 3 polyadenylate-binding protein-interacting protein 4 polyadenylate-binding protein-interacting protein 3 polyadenylate-binding protein-interacting protein 3 polyadenylate-binding protein-interacting protein 4 polyadenylate-binding protein-interacting protein 3 polyadenylate-binding protein-interacting protein 3 polyadenylate-binding protein-interacting protein 4 polyadenylate-binding protein-interacting protein 3 polyadenylate-binding protein-interacting protein 3 polyadenylate-binding protein-interacting protein 3 polyadenylate-binding protein-interacting protein 3 polyadenylate-binding protein-interacting protein 4 polyadenylate-binding protein-interacting protein 4 polyadenylate-binding protein-interacting protein 4-like polyadenylate-binding protein-interacting protein 4-like polyadenylate-binding protein-interacting protein 4-like polyadenylate-binding protein-interacting protein 4 polyadenylate-binding protein-interacting protein 4 polyadenylate-binding protein-interacting protein 4 polyadenylate-binding protein-interacting protein 4 Polyadenylate-binding protein-interacting protein 3 polyadenylate-binding protein-interacting protein 4 polyadenylate-binding protein-interacting protein 4 polyadenylate-binding protein-interacting protein 3-like polyadenylate-binding protein-interacting protein 4-like polyadenylate-binding protein-interacting protein 4 polyadenylate-binding protein-interacting protein 4 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 2
bra03040 Spliceosome 2
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 5
ath03022 Basal transcription factors 2
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00513 Various types of N-glycan biosynthesis 2
ghi04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03250 Viral life cycle - HIV-1 2
vvi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 2
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 3
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03083 Polycomb repressive complex 2
sbi04120 Ubiquitin mediated proteolysis 2
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
bdi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 7
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106348628 125609479 103871067 103842374 820615 841857 107931600 107904324 107914026 102610113 100796073 100782491 100778053 100265239 7478359 7478112 11435252 25500533 101261127 101259622 102606381 102592714 107799444 107785908 107813901 4329365 103654662 100502245 123131655 123143038 123129971 123401219 8084530 100820969 66052209
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