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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106440784   PGR5-like protein 1A, chloroplastic 
 ath-u.5   PGRL1B   PGR5-like B 
 ath-u.5   PGR5-LIKE A   PGR5-LIKE A 
 gma-u.5   100810598   PGR5-like protein 1A, chloroplastic 
 gma-u.5   100785186   PGR5-like protein 1A, chloroplastic 
 gma-u.5   100784314   PGR5-like protein 1B, chloroplastic 
 vvi-u.5   100242824   PGR5-like protein 1B, chloroplastic 
 ppo-u.5   7479243   PGR5-like protein 1A, chloroplastic 
 ppo-u.5   7490927   PGR5-like protein 1A, chloroplastic 
 mtr-u.5   25493634   PGR5-like protein 1B, chloroplastic 
 mtr-u.5   11436266   PGR5-like protein 1A, chloroplastic 
 sly-u.5   101251312   PGR5-like protein 1A, chloroplastic 
 sly-u.5   101247736   PGR5-like protein 1B, chloroplastic 
 osa-u.5   4346096   PGR5-like protein 1A, chloroplastic 
 osa-u.5   4334845   PGR5-like protein 1A, chloroplastic 
 zma-u.5   103632242   PGR5-like protein 1B, chloroplastic 
 zma-u.5   100273908   PGR5-like protein 1B chloroplastic 

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Top 50 coexpressed genes to 106440784 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106440784 (bna-r.1 coexpression data)

CoexMap"106440784"


bnaLOC106440784 | Entrez gene ID : 106440784    
Species bna ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae ghi
Paralog 1 2 3 1 2 2 2 2 2 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009773 [list] [network] photosynthetic electron transport in photosystem I  (28 genes)  IEA  
GO CC
GO:0009535 [list] [network] chloroplast thylakoid membrane  (359 genes)  IEA  
GO MF
GO:0016730 [list] [network] oxidoreductase activity, acting on iron-sulfur proteins as donors  (12 genes)  IEA  
Protein XP_013737976.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  mito 2,  plas 2,  mito_plas 2  (predict for XP_013737976.2)
Subcellular
localization
TargetP
chlo 9,  mito 3  (predict for XP_013737976.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106440784

.
ath-u.5
for
PGRL1B

.
ath-u.5
for
PGR5-LIKE A

.
gma-u.5
for
100810598

.
gma-u.5
for
100785186

.
gma-u.5
for
100784314

.
vvi-u.5
for
100242824

.
ppo-u.5
for
7479243

.
ppo-u.5
for
7490927

.
mtr-u.5
for
25493634

.
mtr-u.5
for
11436266

.
sly-u.5
for
101251312

.
sly-u.5
for
101247736

.
osa-u.5
for
4346096

.
osa-u.5
for
4334845

.
zma-u.5
for
103632242

.
zma-u.5
for
100273908

.


Ortholog ID: 4101
Species ath ath gma gma sly sly osa zma zma bra bra vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sbi sot sot cit bdi bdi nta nta
Symbol PGRL1B PGR5-LIKE A LOC100785186 LOC100810598 LOC101251312 LOC101247736 LOC4346096 LOC103632242 LOC100273908 LOC103861343 LOC103858614 LOC100242824 LOC7490927 LOC7479243 LOC25493634 LOC11436266 LOC123087488 LOC123114448 LOC123395217 LOC107926919 LOC107930000 LOC106440472 LOC106375746 CHLRE_07g340200v5 LOC110432778 LOC110436541 LOC102598666 LOC102584115 LOC102622060 LOC100844822 LOC100829324 LOC107778116 LOC107819369
Function* PGR5-like B PGR5-LIKE A PGR5-like protein 1A, chloroplastic PGR5-like protein 1A, chloroplastic PGR5-like protein 1A, chloroplastic PGR5-like protein 1B, chloroplastic PGR5-like protein 1A, chloroplastic PGR5-like protein 1B, chloroplastic PGR5-like protein 1B chloroplastic PGR5-like protein 1A, chloroplastic PGR5-like protein 1B, chloroplastic PGR5-like protein 1B, chloroplastic PGR5-like protein 1A, chloroplastic PGR5-like protein 1A, chloroplastic PGR5-like protein 1B, chloroplastic PGR5-like protein 1A, chloroplastic PGR5-like protein 1A, chloroplastic PGR5-like protein 1B, chloroplastic PGR5-like protein 1A, chloroplastic PGR5-like protein 1B, chloroplastic PGR5-like protein 1B, chloroplastic PGR5-like protein 1A, chloroplastic PGR5-like protein 1A, chloroplastic uncharacterized protein PGR5-like protein 1A, chloroplastic PGR5-like protein 1B, chloroplastic PGR5-like protein 1B, chloroplastic PGR5-like protein 1B, chloroplastic PGR5-like protein 1A, chloroplastic PGR5-like protein 1A, chloroplastic PGR5-like protein 1A, chloroplastic PGR5-like protein 1A, chloroplastic PGR5-like protein 1A, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04142 Lysosome 4
ath00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00630 Glyoxylate and dicarboxylate metabolism 5
ath00260 Glycine, serine and threonine metabolism 3
ath01200 Carbon metabolism 3
ath01230 Biosynthesis of amino acids 3
ath00220 Arginine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00710 Carbon fixation by Calvin cycle 5
gma01200 Carbon metabolism 5
gma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00710 Carbon fixation by Calvin cycle 9
gma01200 Carbon metabolism 9
gma00195 Photosynthesis 4
gma00030 Pentose phosphate pathway 3
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 6
sly00195 Photosynthesis 6
sly00260 Glycine, serine and threonine metabolism 3
sly00630 Glyoxylate and dicarboxylate metabolism 3
sly00710 Carbon fixation by Calvin cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00630 Glyoxylate and dicarboxylate metabolism 4
osa01200 Carbon metabolism 4
osa00710 Carbon fixation by Calvin cycle 3
osa01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00710 Carbon fixation by Calvin cycle 6
zma01200 Carbon metabolism 6
zma00195 Photosynthesis 4
zma00196 Photosynthesis - antenna proteins 3
zma00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 5
zma01230 Biosynthesis of amino acids 3
zma00710 Carbon fixation by Calvin cycle 3
zma01200 Carbon metabolism 3
zma00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00196 Photosynthesis - antenna proteins 5
bra00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00220 Arginine biosynthesis 2
bra00250 Alanine, aspartate and glutamate metabolism 2
bra00260 Glycine, serine and threonine metabolism 2
bra00630 Glyoxylate and dicarboxylate metabolism 2
bra00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 7
vvi00196 Photosynthesis - antenna proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 4
ppo00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 4
ppo00196 Photosynthesis - antenna proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 4
tae00710 Carbon fixation by Calvin cycle 4
tae01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00710 Carbon fixation by Calvin cycle 5
tae01200 Carbon metabolism 5
tae00195 Photosynthesis 3
tae00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00250 Alanine, aspartate and glutamate metabolism 4
ghi00260 Glycine, serine and threonine metabolism 4
ghi00630 Glyoxylate and dicarboxylate metabolism 4
ghi01200 Carbon metabolism 4
ghi01210 2-Oxocarboxylic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00250 Alanine, aspartate and glutamate metabolism 4
ghi00260 Glycine, serine and threonine metabolism 4
ghi00630 Glyoxylate and dicarboxylate metabolism 4
ghi01200 Carbon metabolism 4
ghi01210 2-Oxocarboxylic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00020 Citrate cycle (TCA cycle) 2
bna00270 Cysteine and methionine metabolism 2
bna00566 Sulfoquinovose metabolism 2
bna00620 Pyruvate metabolism 2
bna00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01200 Carbon metabolism 5
sbi00196 Photosynthesis - antenna proteins 5
sbi00710 Carbon fixation by Calvin cycle 4
sbi00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 9
sot00630 Glyoxylate and dicarboxylate metabolism 7
sot00710 Carbon fixation by Calvin cycle 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 6
sot01200 Carbon metabolism 3
sot00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 3
cit00195 Photosynthesis 3
cit00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 6
bdi00630 Glyoxylate and dicarboxylate metabolism 5
bdi00710 Carbon fixation by Calvin cycle 3
bdi01230 Biosynthesis of amino acids 3
bdi00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00630 Glyoxylate and dicarboxylate metabolism 2
bdi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00010 Glycolysis / Gluconeogenesis 4
nta00030 Pentose phosphate pathway 4
nta00051 Fructose and mannose metabolism 4
nta00710 Carbon fixation by Calvin cycle 4
nta01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 4
nta00860 Porphyrin metabolism 2
nta00010 Glycolysis / Gluconeogenesis 2
nta00030 Pentose phosphate pathway 2
nta00051 Fructose and mannose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 826803 828388 100785186 100810598 101251312 101247736 4346096 103632242 100273908 103861343 103858614 100242824 7490927 7479243 25493634 11436266 123087488 123114448 123395217 107926919 107930000 106440472 106375746 5718097 110432778 110436541 102598666 102584115 102622060 100844822 100829324 107778116 107819369
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