Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103872042   putative pectate lyase 2 
 bra-r.6   103834235   probable pectate lyase 16 
 ath-u.5   RHS14   root hair specific 14 
 ghi-r.1   107935391   probable pectate lyase 16 
 mtr-u.5   25486210   putative pectate lyase 2 

close


Top 50 coexpressed genes to 103872042 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 103872042 (bra-r.6 coexpression data)

CoexMap"106443426"


bnaLOC106443426 | Entrez gene ID : 106443426    
Species bra ath ghi mtr sbi osa gma sot sly cit tae bna hvu ppo vvi zma cre nta bdi
Paralog 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna00040 [list] [network] Pentose and glucuronate interconversions (366 genes)
GO BP
GO CC
GO MF
GO:0030570 [list] [network] pectate lyase activity  (104 genes)  IEA  
Protein XP_013740444.1 [sequence] [blastp]
Subcellular
localization
wolf
vacu 4,  extr 3,  chlo 1,  cyto 1,  mito 1,  E.R. 1,  cyto_E.R. 1  (predict for XP_013740444.1)
Subcellular
localization
TargetP
scret 9  (predict for XP_013740444.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103872042
bra-r.6
for
103834235
ath-u.5
for
RHS14
ghi-r.1
for
107935391
mtr-u.5
for
25486210


Ortholog ID: 7671
Species bra bra ath ghi mtr
Symbol LOC103872042 LOC103834235 RHS14 LOC107935391 LOC25486210
Function* putative pectate lyase 2 probable pectate lyase 16 root hair specific 14 probable pectate lyase 16 putative pectate lyase 2
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00940 Phenylpropanoid biosynthesis 3
mtr00040 Pentose and glucuronate interconversions 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103872042 103834235 828297 107935391 25486210
The preparation time of this page was 0.1 [sec].