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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106445097   peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic 
 ath-u.5   AT3G60380   cotton fiber protein 
 ath-u.5   AT4G16790   hydroxyproline-rich glycoprotein family protein 
 gma-u.5   102659662   uncharacterized protein DDB_G0284459 
 vvi-u.5   104878316   uncharacterized LOC104878316 
 vvi-u.5   104881830   uncharacterized LOC104881830 
 ppo-u.5   7483792   uncharacterized LOC7483792 
 ppo-u.5   7461989   auxilin-related protein 1 
 mtr-u.5   25497466   uncharacterized LOC25497466 
 mtr-u.5   11410462   uncharacterized LOC11410462 
 sly-u.5   101245665   uncharacterized LOC101245665 
 sly-u.5   104648963   uncharacterized LOC104648963 
 osa-u.5   4349390   cell wall protein RBR3 
 zma-u.5   100284853   glycoprotein 
 zma-u.5   103638926   serine/arginine repetitive matrix protein 1 

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Top 50 coexpressed genes to 106445097 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106445097 (bna-r.1 coexpression data)

CoexMap"106445097"


bnaLOC106445097 | Entrez gene ID : 106445097    
Species bna ath gma vvi ppo mtr sly osa zma nta tae bdi sot bra sbi hvu cit cre ghi
Paralog 1 2 1 2 2 2 2 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003755 [list] [network] peptidyl-prolyl cis-trans isomerase activity  (177 genes)  IEA  
Protein XP_013742049.1 [sequence] [blastp]
XP_048634266.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_013742049.1)
chlo 5,  plas 3,  chlo_mito 3  (predict for XP_048634266.1)
Subcellular
localization
TargetP
chlo 3,  other 3  (predict for XP_013742049.1)
chlo 5  (predict for XP_048634266.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106445097

.
ath-u.5
for
AT3G60380

.
ath-u.5
for
AT4G16790

.
gma-u.5
for
102659662

.
vvi-u.5
for
104878316

.
vvi-u.5
for
104881830

.
ppo-u.5
for
7483792

.
ppo-u.5
for
7461989

.
mtr-u.5
for
25497466

.
mtr-u.5
for
11410462

.
sly-u.5
for
101245665

.
sly-u.5
for
104648963

.
osa-u.5
for
4349390

.
zma-u.5
for
100284853

.
zma-u.5
for
103638926

.


Ortholog ID: 2481
Species ath ath gma sly sly osa zma zma bra bra vvi vvi ppo mtr mtr tae tae hvu ghi bna bna sbi sot sot cit cit bdi nta nta
Symbol AT3G60380 AT4G16790 LOC102659662 LOC104648963 LOC101245665 LOC4349390 LOC103638926 LOC100284853 LOC103862884 LOC103833978 LOC104881830 LOC104878316 LOC7461989 LOC11410462 LOC25497466 LOC123181679 LOC123052416 LOC123411734 LOC107933703 LOC106403845 LOC106445097 LOC8055642 LOC102597541 LOC107062983 LOC102607181 LOC102617569 LOC100830834 LOC107775760 LOC142178239
Function* cotton fiber protein hydroxyproline-rich glycoprotein family protein uncharacterized protein DDB_G0284459 uncharacterized LOC104648963 uncharacterized LOC101245665 cell wall protein RBR3 serine/arginine repetitive matrix protein 1 glycoprotein uncharacterized LOC103862884 serine/arginine repetitive matrix protein 1 uncharacterized LOC104881830 uncharacterized LOC104878316 auxilin-related protein 1 uncharacterized LOC11410462 uncharacterized LOC25497466 serine/arginine repetitive matrix protein 1 protein ENL protein ENL-like uncharacterized LOC107933703 uncharacterized LOC106403845 peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic facilitated trehalose transporter Tret1 uncharacterized LOC102597541 uncharacterized LOC107062983 uncharacterized LOC102607181 uncharacterized LOC102617569 serine/arginine repetitive matrix protein 1 uncharacterized LOC107775760 uncharacterized LOC142178239
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00330 Arginine and proline metabolism 2
mtr00360 Phenylalanine metabolism 2
mtr00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
tae04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 9
bna00240 Pyrimidine metabolism 4
bna01232 Nucleotide metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00906 Carotenoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 825209 827385 102659662 104648963 101245665 4349390 103638926 100284853 103862884 103833978 104881830 104878316 7461989 11410462 25497466 123181679 123052416 123411734 107933703 106403845 106445097 8055642 102597541 107062983 102607181 102617569 100830834 107775760 142178239
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