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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106445315   putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 
 ath-u.5   AT3G03920   H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein 
 gma-u.5   100788981   putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 
 gma-u.5   100799823   putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 
 vvi-u.5   100245323   putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 
 ppo-u.5   7489670   putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 
 ppo-u.5   18108236   putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 
 mtr-u.5   25498984   putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 
 sly-u.5   101246000   putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 
 osa-u.5   4350782   putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 
 zma-u.5   100193822   Putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 
 zma-u.5   100273853   putative H/ACA ribonucleoprotein complex subunit family protein 

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Top 50 coexpressed genes to 106445315 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106445315 (bna-r.1 coexpression data)

CoexMap"106445315"


bnaLOC106445315 | Entrez gene ID : 106445315    
Species bna ath gma vvi ppo mtr sly osa zma nta tae bdi sot bra sbi hvu cit cre ghi
Paralog 1 1 2 1 2 1 1 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03008 [list] [network] Ribosome biogenesis in eukaryotes (6477 genes)
GO BP
GO:0000454 [list] [network] snoRNA guided rRNA pseudouridine synthesis  (7 genes)  IEA  
GO:0042254 [list] [network] ribosome biogenesis  (963 genes)  IEA  
GO CC
GO:0031429 [list] [network] box H/ACA snoRNP complex  (23 genes)  IEA  
GO MF
GO:0034513 [list] [network] box H/ACA snoRNA binding  (19 genes)  IEA  
Protein XP_013742294.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  nucl 2,  cyto 2,  mito 2,  cyto_nucl 2  (predict for XP_013742294.2)
Subcellular
localization
TargetP
mito 7,  other 6  (predict for XP_013742294.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106445315

.
ath-u.5
for
AT3G03920

.
gma-u.5
for
100788981

.
gma-u.5
for
100799823

.
vvi-u.5
for
100245323

.
ppo-u.5
for
7489670

.
ppo-u.5
for
18108236

.
mtr-u.5
for
25498984

.
sly-u.5
for
101246000

.
osa-u.5
for
4350782

.
zma-u.5
for
100193822

.
zma-u.5
for
100273853

.


Ortholog ID: 4911
Species ath gma gma sly osa zma zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT3G03920 LOC100799823 LOC100788981 LOC101246000 LOC4350782 LOC100193822 LOC100273853 LOC103828224 LOC103851163 LOC100245323 LOC18108236 LOC7489670 LOC25498984 LOC123091807 LOC123065747 LOC123448556 LOC107898138 LOC107894589 LOC106445315 LOC106433072 CHLRE_13g567850v5 LOC8071965 LOC102586015 LOC102619891 LOC100830464 LOC107762965 LOC107778989
Function* H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 Putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 putative H/ACA ribonucleoprotein complex subunit family protein putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 uncharacterized protein putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 putative H/ACA ribonucleoprotein complex subunit 1-like protein 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 6
ath03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 8
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 5
gma03008 Ribosome biogenesis in eukaryotes 5
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 8
sly03010 Ribosome 7
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 6
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 10
ppo03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 11
ppo03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 4
mtr03010 Ribosome 3
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 9
tae03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 7
tae03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 6
hvu03008 Ribosome biogenesis in eukaryotes 4
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 6
bna03018 RNA degradation 2
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 12
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 6
sbi03008 Ribosome biogenesis in eukaryotes 2
sbi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 6
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 8
bdi03040 Spliceosome 2
bdi03010 Ribosome 2
bdi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 6
nta03008 Ribosome biogenesis in eukaryotes 4
nta03082 ATP-dependent chromatin remodeling 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 5
nta03082 ATP-dependent chromatin remodeling 2
nta03010 Ribosome 2
nta03040 Spliceosome 2
nta03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821062 100799823 100788981 101246000 4350782 100193822 100273853 103828224 103851163 100245323 18108236 7489670 25498984 123091807 123065747 123448556 107898138 107894589 106445315 106433072 66055923 8071965 102586015 102619891 100830464 107762965 107778989
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