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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106445749   probable histone H2A.3 
 ath-u.5   HTA10   histone H2A 10 
 ath-u.5   HTA13   histone H2A 13 
 ath-u.5   HTA2   histone H2A 2 
 gma-u.5   100305465   uncharacterized LOC100305465 
 gma-u.5   100782447   probable histone H2A.1 
 gma-u.5   100818215   histone H2AX 
 vvi-u.5   100254490   histone H2AX 
 vvi-u.5   100265822   probable histone H2A.2 
 vvi-u.5   100257319   histone H2AX-like 
 ppo-u.5   112323895   histone H2AX 
 ppo-u.5   7473316   histone H2AX 
 ppo-u.5   18109775   histone H2AX 
 mtr-u.5   11408670   histone H2A.6 
 mtr-u.5   11409476   histone H2A.6 
 mtr-u.5   11423173   histone H2AX 
 sly-u.5   101247665   probable histone H2A.1 
 sly-u.5   101255365   probable histone H2AXb 
 sly-u.5   101256806   probable histone H2AXb 
 osa-u.5   4343518   probable histone H2A.1 
 osa-u.5   4333939   probable histone H2AXa 
 osa-u.5   4343519   probable histone H2A.2 
 zma-u.5   100193816   uncharacterized LOC100193816 
 zma-u.5   100194327   Histone H2A 
 zma-u.5   103640970   probable histone H2AXb 

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Top 50 coexpressed genes to 106445749 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106445749 (bna-r.1 coexpression data)

CoexMap"106445749"


bnaLOC106445749 | Entrez gene ID : 106445749    
Species bna ath gma vvi ppo mtr sly osa zma hvu cit bra ghi sbi bdi nta tae cre sot
Paralog 1 3 3 3 3 3 3 3 3 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03082 [list] [network] ATP-dependent chromatin remodeling (198 genes)
GO BP
GO CC
GO:0000786 [list] [network] nucleosome  (197 genes)  IEA  
GO MF
GO:0030527 [list] [network] structural constituent of chromatin  (152 genes)  IEA  
GO:0046982 [list] [network] protein heterodimerization activity  (268 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (6522 genes)  IEA  
Protein XP_013742831.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  chlo 1  (predict for XP_013742831.1)
Subcellular
localization
TargetP
mito 5  (predict for XP_013742831.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106445749
ath-u.5
for
HTA10
ath-u.5
for
HTA13
ath-u.5
for
HTA2
gma-u.5
for
100305465
gma-u.5
for
100782447
gma-u.5
for
100818215
vvi-u.5
for
100254490
vvi-u.5
for
100265822
vvi-u.5
for
100257319
ppo-u.5
for
112323895
ppo-u.5
for
7473316
ppo-u.5
for
18109775
mtr-u.5
for
11408670
mtr-u.5
for
11409476
mtr-u.5
for
11423173
sly-u.5
for
101247665
sly-u.5
for
101255365
sly-u.5
for
101256806
osa-u.5
for
4343518
osa-u.5
for
4333939
osa-u.5
for
4343519
zma-u.5
for
100193816
zma-u.5
for
100194327
zma-u.5
for
103640970


Ortholog ID: 242
Species bna bra ath ath ghi ghi cit cit gma gma vvi vvi ppo ppo mtr mtr sly sly sot sot nta nta osa osa zma zma tae tae hvu hvu sbi sbi bdi bdi cre cre
Symbol LOC125603080 LOC103832842 H2AXA HTA10 LOC107899136 LOC107920392 LOC102620423 LOC102618811 LOC106798115 LOC100818215 LOC100259607 LOC100254490 LOC18095880 LOC112323895 LOC11443483 LOC11408670 LOC101264975 LOC101262690 LOC102592368 LOC102586233 LOC107822337 LOC107800855 LOC9267462 LOC4333939 LOC100273666 LOC100194327 LOC123044613 LOC123115855 LOC123425798 LOC123425799 LOC8081715 LOC8081716 LOC100846160 LOC100830394 CHLRE_12g506250v5 CHLRE_17g714100v5
Function* probable histone H2A.2 probable histone H2A.1 Histone superfamily protein histone H2A 10 probable histone H2AXb probable histone H2A.1 histone H2AX histone H2AX histone H2AX histone H2AX histone H2AX histone H2AX histone H2A.6 histone H2AX probable histone H2AXb histone H2A.6 histone H2AX-like histone H2A.6 probable histone H2AXb histone H2A.6-like histone H2A.6 histone H2AX-like probable histone H2A.3 probable histone H2AXa uncharacterized LOC100273666 Histone H2A histone H2A.4-like probable histone H2AXb probable histone H2A.2 histone H2A.4 probable histone H2A.1 probable histone H2A.2 probable histone H2AXa probable histone H2A.2 uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03030 DNA replication 2
cit03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 5
gma00240 Pyrimidine metabolism 2
gma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00240 Pyrimidine metabolism 3
vvi01232 Nucleotide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 4
ppo03013 Nucleocytoplasmic transport 2
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 4
ppo04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 6
sot00240 Pyrimidine metabolism 3
sot01232 Nucleotide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 3
nta04075 Plant hormone signal transduction 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03018 RNA degradation 5
osa03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 4
hvu04141 Protein processing in endoplasmic reticulum 2
hvu04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 6
bdi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03082 ATP-dependent chromatin remodeling 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03082 ATP-dependent chromatin remodeling 16
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 125603080 103832842 837409 841528 107899136 107920392 102620423 102618811 106798115 100818215 100259607 100254490 18095880 112323895 11443483 11408670 101264975 101262690 102592368 102586233 107822337 107800855 9267462 4333939 100273666 100194327 123044613 123115855 123425798 123425799 8081715 8081716 100846160 100830394 5716480 5725954
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