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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106445839   protein pleiotropic regulatory locus 1 
 ath-u.5   AT3G16650   Transducin/WD40 repeat-like superfamily protein 
 ath-u.5   PRL1   pleiotropic regulatory locus 1 
 gma-u.5   100782357   protein pleiotropic regulatory locus 1 
 gma-u.5   100775526   protein pleiotropic regulatory locus 1 
 vvi-u.5   100248018   protein pleiotropic regulatory locus 1 
 ppo-u.5   7475907   protein pleiotropic regulatory locus 1 
 mtr-u.5   25488112   protein pleiotropic regulatory locus 1 
 sly-u.5   101250160   protein pleiotropic regulatory locus 1 
 osa-u.5   4332781   protein pleiotropic regulatory locus 1 
 zma-u.5   100282926   uncharacterized LOC100282926 

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Top 50 coexpressed genes to 106445839 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106445839 (bna-r.1 coexpression data)

CoexMap"106445839"


bnaLOC106445839 | Entrez gene ID : 106445839    
Species bna ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae ghi
Paralog 1 2 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03040 [list] [network] Spliceosome (912 genes)
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (548 genes)  IEA  
GO CC
GO:0000974 [list] [network] Prp19 complex  (51 genes)  IEA  
GO:0071011 [list] [network] precatalytic spliceosome  (154 genes)  IEA  
GO:0071013 [list] [network] catalytic step 2 spliceosome  (222 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (12789 genes)  IEA  
Protein XP_013742931.1 [sequence] [blastp]
XP_048618823.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 1,  pero 1,  cyto_pero 1  (predict for XP_013742931.1)
nucl 6,  cyto 1,  pero 1,  cyto_pero 1  (predict for XP_048618823.1)
Subcellular
localization
TargetP
other 6,  chlo 5  (predict for XP_013742931.1)
other 6,  chlo 5  (predict for XP_048618823.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106445839

.
ath-u.5
for
AT3G16650

.
ath-u.5
for
PRL1

.
gma-u.5
for
100782357

.
gma-u.5
for
100775526

.
vvi-u.5
for
100248018

.
ppo-u.5
for
7475907

.
mtr-u.5
for
25488112

.
sly-u.5
for
101250160

.
osa-u.5
for
4332781

.
zma-u.5
for
100282926

.


Ortholog ID: 8942
Species ath ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol PRL1 AT3G16650 LOC100782357 LOC100775526 LOC101250160 LOC4332781 LOC100282926 LOC103860812 LOC100248018 LOC7475907 LOC25488112 LOC123069565 LOC123078054 LOC123443403 LOC107912450 LOC107933242 LOC106445839 LOC106419472 CHLRE_10g446900v5 LOC110436336 LOC102589483 LOC102611423 LOC100823370 LOC107798658 LOC107810185
Function* pleiotropic regulatory locus 1 Transducin/WD40 repeat-like superfamily protein protein pleiotropic regulatory locus 1 protein pleiotropic regulatory locus 1 protein pleiotropic regulatory locus 1 protein pleiotropic regulatory locus 1 uncharacterized LOC100282926 protein pleiotropic regulatory locus 1 protein pleiotropic regulatory locus 1 protein pleiotropic regulatory locus 1 protein pleiotropic regulatory locus 1 protein pleiotropic regulatory locus 1 protein pleiotropic regulatory locus 1 protein pleiotropic regulatory locus 1 protein pleiotropic regulatory locus 1 protein pleiotropic regulatory locus 1 protein pleiotropic regulatory locus 1 protein pleiotropic regulatory locus 1 uncharacterized protein protein pleiotropic regulatory locus 1 protein pleiotropic regulatory locus 1 protein pleiotropic regulatory locus 1 protein pleiotropic regulatory locus 1 protein pleiotropic regulatory locus 1 protein pleiotropic regulatory locus 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 6
ath03082 ATP-dependent chromatin remodeling 3
ath03040 Spliceosome 2
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 2
ath03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
gma03010 Ribosome 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 3
sly04141 Protein processing in endoplasmic reticulum 3
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 5
zma03015 mRNA surveillance pathway 3
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
vvi03022 Basal transcription factors 2
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 2
ppo03010 Ribosome 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 7
mtr03040 Spliceosome 3
mtr00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
tae03008 Ribosome biogenesis in eukaryotes 4
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 9
tae03013 Nucleocytoplasmic transport 4
tae03008 Ribosome biogenesis in eukaryotes 3
tae03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 7
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 7
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
bna03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
bna03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
sbi03022 Basal transcription factors 2
sbi03420 Nucleotide excision repair 2
sbi00340 Histidine metabolism 2
sbi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 5
cit03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 4
nta03040 Spliceosome 2
nta00010 Glycolysis / Gluconeogenesis 2
nta00071 Fatty acid degradation 2
nta00350 Tyrosine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
nta04712 Circadian rhythm - plant 4
nta01200 Carbon metabolism 4
nta03040 Spliceosome 2
nta00010 Glycolysis / Gluconeogenesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827272 820917 100782357 100775526 101250160 4332781 100282926 103860812 100248018 7475907 25488112 123069565 123078054 123443403 107912450 107933242 106445839 106419472 5724026 110436336 102589483 102611423 100823370 107798658 107810185
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