ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bna-r.1	106446144	glutaredoxin-C2
bna-r.1	106450550	glutaredoxin
bna-r.1	106425765	glutaredoxin-C4
bna-r.1	106422799	glutaredoxin-C1-like
bra-r.6	103837443	glutaredoxin-C1
bra-r.6	103873728	glutaredoxin-C1
bra-r.6	103863982	glutaredoxin-C2
ath-u.5	AT5G20500	Glutaredoxin family protein
ath-u.5	GRXC2	Glutaredoxin family protein
ath-u.5	GRXC1	Thioredoxin superfamily protein
ghi-r.1	107892273	glutaredoxin
ghi-r.1	107939805	glutaredoxin
ghi-r.1	107888669	glutaredoxin
cit-r.1	102625900	glutaredoxin-C4
cit-r.1	102626795	glutaredoxin
gma-u.5	100305517	uncharacterized LOC100305517
gma-u.5	100500348	uncharacterized LOC100500348
gma-u.5	100305955	glutaredoxin family protein
vvi-u.5	100241059	glutaredoxin-C4
vvi-u.5	100241967	glutaredoxin-C3
vvi-u.5	100260385	glutaredoxin
ppo-u.5	7457752	glutaredoxin-C1
ppo-u.5	7484039	glutaredoxin-C4
ppo-u.5	7495519	glutaredoxin-C3
mtr-u.5	11438755	glutaredoxin-C4
mtr-u.5	11430185	glutaredoxin
mtr-u.5	11408074	glutaredoxin-C3
sly-u.5	101268063	glutaredoxin-C4
sly-u.5	101247085	glutaredoxin-C3
sly-u.5	544298	glutaredoxin
sot-r.1	GRX2	glutaredoxin
sot-r.1	102591615	glutaredoxin-C4
nta-r.1	107780843	glutaredoxin-C4
nta-r.1	107776599	uncharacterized LOC107776599
nta-r.1	107784788	uncharacterized LOC107784788
osa-u.5	4341733	glutaredoxin-C8-like
osa-u.5	4330145	monothiol glutaredoxin-S6-like
zma-u.5	100303864	Grx_C2.1 - glutaredoxin subgroup I
zma-u.5	100282495	Grx_C4 - glutaredoxin subgroup I
tae-r.2	123157506	glutaredoxin-C8
tae-r.2	542961	glutaredoxin-C6
tae-r.2	100192162	glutaredoxin-C6
hvu-r.1	123427207	glutaredoxin-C6-like
sbi-r.1	8075160	monothiol glutaredoxin-S6
sbi-r.1	8072478	glutaredoxin-C4, chloroplastic
sbi-r.1	8058458	glutaredoxin-C8
bdi-r.1	100832099	glutaredoxin-C6
bdi-r.1	100825578	glutaredoxin-C8
bdi-r.1	100835637	monothiol glutaredoxin-S6
cre-r.1	CHLRE_12g550400v5	uncharacterized protein
cre-r.1	CHLRE_12g513750v5	uncharacterized protein

Top 50 coexpressed genes to 106446144 (bna-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 106446144 (bna-r.1 coexpression data)

CoexMap"106446144"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0034599 [list] [network] cellular response to oxidative stress

(129 genes)

IEA

GO CC

GO:0005737 [list] [network] cytoplasm

(16489 genes)

IEA

GO MF

GO:0015038 [list] [network] glutathione disulfide oxidoreductase activity

(41 genes)

IEA

Protein

XP_048609255.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 9, mito 1, extr 1

(predict for XP_048609255.1)

Subcellular
localization
TargetP

scret 7

(predict for XP_048609255.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for 106446144	bna-r.1 for 106450550	bna-r.1 for 106425765	bna-r.1 for 106422799	bra-r.6 for 103837443	bra-r.6 for 103873728	bra-r.6 for 103863982	ath-u.5 for AT5G20500	ath-u.5 for GRXC2	ath-u.5 for GRXC1	ghi-r.1 for 107892273	ghi-r.1 for 107939805	ghi-r.1 for 107888669	cit-r.1 for 102625900	cit-r.1 for 102626795	gma-u.5 for 100305517	gma-u.5 for 100500348	gma-u.5 for 100305955	vvi-u.5 for 100241059	vvi-u.5 for 100241967	vvi-u.5 for 100260385	ppo-u.5 for 7457752	ppo-u.5 for 7484039	ppo-u.5 for 7495519	mtr-u.5 for 11438755	mtr-u.5 for 11430185	mtr-u.5 for 11408074	sly-u.5 for 101268063	sly-u.5 for 101247085	sly-u.5 for 544298	sot-r.1 for GRX2	sot-r.1 for 102591615	nta-r.1 for 107780843	nta-r.1 for 107776599	nta-r.1 for 107784788	osa-u.5 for 4341733	osa-u.5 for 4330145	zma-u.5 for 100303864	zma-u.5 for 100282495	tae-r.2 for 123157506	tae-r.2 for 542961	tae-r.2 for 100192162	hvu-r.1 for 123427207	sbi-r.1 for 8075160	sbi-r.1 for 8072478	sbi-r.1 for 8058458	bdi-r.1 for 100832099	bdi-r.1 for 100825578	bdi-r.1 for 100835637	cre-r.1 for CHLRE_12g550400v5	cre-r.1 for CHLRE_12g513750v5

Ortholog

Ortholog ID: 816

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

GRXC1

GRX2

Function^*

glutaredoxin-C2

glutaredoxin-C1-like

glutaredoxin-C1

glutaredoxin-C4

Glutaredoxin family protein

Thioredoxin superfamily protein

Glutaredoxin family protein

glutaredoxin

glutaredoxin-C3

glutaredoxin-C4

glutaredoxin-C3

uncharacterized LOC100305517

glutaredoxin family protein

uncharacterized LOC100527634

glutaredoxin-C3

glutaredoxin

glutaredoxin-C3

glutaredoxin

glutaredoxin-C4

glutaredoxin

glutaredoxin-C4

glutaredoxin

uncharacterized LOC107776599

uncharacterized LOC107784788

glutaredoxin-C4-like

monothiol glutaredoxin-S6-like

glutaredoxin-C4, chloroplastic-like

Grx_C4 - glutaredoxin subgroup I

glutaredoxin homolog 1

glutaredoxin-C8

monothiol glutaredoxin-S6

glutaredoxin-C8

glutaredoxin-C6-like

monothiol glutaredoxin-S6

glutaredoxin-C4, chloroplastic

glutaredoxin-C8

glutaredoxin-C6

glutaredoxin-C8

monothiol glutaredoxin-S6

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04016	MAPK signaling pathway - plant	3
bna00620	Pyruvate metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03018	RNA degradation	4
bna03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03018	RNA degradation	4
bna03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00071	Fatty acid degradation	4
bra01212	Fatty acid metabolism	4
bra00410	beta-Alanine metabolism	2
bra01200	Carbon metabolism	2
bra00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	5
ath03060	Protein export	2
ath00510	N-Glycan biosynthesis	2
ath00513	Various types of N-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04136	Autophagy - other	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00480	Glutathione metabolism	4
ath00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03018	RNA degradation	2
ghi03040	Spliceosome	2
ghi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi01240	Biosynthesis of cofactors	3
ghi00750	Vitamin B6 metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00010	Glycolysis / Gluconeogenesis	2
ghi00051	Fructose and mannose metabolism	2
ghi00562	Inositol phosphate metabolism	2
ghi00710	Carbon fixation by Calvin cycle	2
ghi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04144	Endocytosis	2
cit03050	Proteasome	2
cit04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00190	Oxidative phosphorylation	6
cit03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04144	Endocytosis	4
gma03060	Protein export	3
gma00230	Purine metabolism	2
gma01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	6
vvi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04141	Protein processing in endoplasmic reticulum	4
vvi00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03018	RNA degradation	2
ppo03040	Spliceosome	2
ppo00480	Glutathione metabolism	2
ppo00280	Valine, leucine and isoleucine degradation	2
ppo01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	2
mtr00240	Pyrimidine metabolism	2
mtr01232	Nucleotide metabolism	2
mtr01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00510	N-Glycan biosynthesis	4
sly00513	Various types of N-glycan biosynthesis	4
sly04141	Protein processing in endoplasmic reticulum	4
sly03040	Spliceosome	3
sly03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03050	Proteasome	6
sly00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00190	Oxidative phosphorylation	5
sot04145	Phagosome	4
sot04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00190	Oxidative phosphorylation	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04141	Protein processing in endoplasmic reticulum	4
osa03060	Protein export	3
osa04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04712	Circadian rhythm - plant	3
osa00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00190	Oxidative phosphorylation	7
zma04145	Phagosome	7
zma04142	Lysosome	3
zma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00190	Oxidative phosphorylation	7
zma00020	Citrate cycle (TCA cycle)	3
zma01200	Carbon metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00230	Purine metabolism	2
tae00240	Pyrimidine metabolism	2
tae01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04144	Endocytosis	3
hvu04146	Peroxisome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00190	Oxidative phosphorylation	4
sbi00520	Amino sugar and nucleotide sugar metabolism	2
sbi01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00010	Glycolysis / Gluconeogenesis	10
bdi01200	Carbon metabolism	10
bdi01230	Biosynthesis of amino acids	10
bdi00710	Carbon fixation by Calvin cycle	7
bdi00051	Fructose and mannose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03420	Nucleotide excision repair	3
cre03020	RNA polymerase	2
cre04120	Ubiquitin mediated proteolysis	2
cre04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00195	Photosynthesis	4
cre03010	Ribosome	3
cre00710	Carbon fixation by Calvin cycle	2
cre01200	Carbon metabolism	2
cre00190	Oxidative phosphorylation	2

Expression

Expression pattern

Entrez Gene ID^*

106446144

106422799

106347869

103837443

103845670

832172

836423

844073

107888669

107897612

107897861

102625900

102626837

100305517

100305955

100527634

100241967

100260385

100244121

7495519

7496831

11438755

11430185

11438922

101268063

544298

101254986

102577528

102597992

107776599

107784788

107784219

4330145

4329999

100282495

100283339

123157506

123129639

123149342

123427207

8075160

8072478

8058458

100832099

100825578

100835637

5719651

5728538

The preparation time of this page was 0.2 [sec].


Species	bna	bra	ath	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	3	3	3	2	3	3	3	3	3	2	3	2	2	3	1	3	3	2

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 106446144 (bna-r.1 coexpression data)

Top 50 enrichment test to 106446144 (bna-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**