ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bna-r.1	106446920	histone H4
bna-r.1	106451040	histone H4
bna-r.1	106447366	histone H4
bna-r.1	106437381	histone H4
bra-r.6	103829765	histone H4
bra-r.6	103865608	histone H4
ath-u.5	AT1G07660	Histone superfamily protein
ath-u.5	AT1G07820	Histone superfamily protein
ath-u.5	AT5G59970	Histone superfamily protein
ghi-r.1	107950268	histone H4
ghi-r.1	107932686	histone H4
ghi-r.1	107938402	histone H4
cit-r.1	102629767	histone H4
cit-r.1	102614670	histone H4
cit-r.1	102607827	histone H4
gma-u.5	100804633	histone H4
gma-u.5	100800769	histone H4
gma-u.5	100805597	histone H4
vvi-u.5	100267358	histone H4
vvi-u.5	100263191	histone H4
vvi-u.5	100244527	uncharacterized LOC100244527
ppo-u.5	7480176	histone H4
ppo-u.5	18099206	histone H4
ppo-u.5	18099209	histone H4
mtr-u.5	25490772	uncharacterized LOC25490772
mtr-u.5	11446478	histone H4
mtr-u.5	11445181	histone H4
sly-u.5	101264401	histone H4
sly-u.5	101256941	histone H4
sot-r.1	102597419	histone H4
sot-r.1	102590298	histone H4
sot-r.1	102590781	uncharacterized LOC102590781
nta-r.1	107764046	histone H4
nta-r.1	107773508	histone H4
nta-r.1	107777308	histone H4
osa-u.5	4339029	histone H4
osa-u.5	4347135	histone H4
osa-u.5	4347799	histone H4
zma-u.5	103631010	histone H4
zma-u.5	103633139	histone H4
zma-u.5	103636523	histone H4
tae-r.2	123087709	histone H4
tae-r.2	123051161	histone H4
tae-r.2	123104715	histone H4
hvu-r.1	123400672	uncharacterized LOC123400672
hvu-r.1	123397931	histone H4
sbi-r.1	8058810	histone H4
sbi-r.1	8056567	histone H4
sbi-r.1	8056569	histone H4
bdi-r.1	100845838	histone H4
bdi-r.1	104584388	histone H4
bdi-r.1	100845127	histone H4
cre-r.1	CHLRE_06g266600v5	uncharacterized protein
cre-r.1	CHLRE_06g265450v5	uncharacterized protein
cre-r.1	CHLRE_06g265200v5	uncharacterized protein

Top 50 coexpressed genes to 106446920 (bna-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 106446920 (bna-r.1 coexpression data)

CoexMap"106446920"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0006334 [list] [network] nucleosome assembly

(137 genes)

IEA

GO CC

GO:0000786 [list] [network] nucleosome

(197 genes)

IEA

GO MF

GO:0030527 [list] [network] structural constituent of chromatin	(152 genes)	IEA
GO:0046982 [list] [network] protein heterodimerization activity	(268 genes)	IEA
GO:0003677 [list] [network] DNA binding	(6522 genes)	IEA

Protein

XP_013744194.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, cyto 3

(predict for XP_013744194.1)

Subcellular
localization
TargetP

other 5, mito 3

(predict for XP_013744194.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for 106446920	bna-r.1 for 106451040	bna-r.1 for 106447366	bna-r.1 for 106437381	bra-r.6 for 103829765	bra-r.6 for 103865608	ath-u.5 for AT1G07660	ath-u.5 for AT1G07820	ath-u.5 for AT5G59970	ghi-r.1 for 107950268	ghi-r.1 for 107932686	ghi-r.1 for 107938402	cit-r.1 for 102629767	cit-r.1 for 102614670	cit-r.1 for 102607827	gma-u.5 for 100804633	gma-u.5 for 100800769	gma-u.5 for 100805597	vvi-u.5 for 100267358	vvi-u.5 for 100263191	vvi-u.5 for 100244527	ppo-u.5 for 7480176	ppo-u.5 for 18099206	ppo-u.5 for 18099209	mtr-u.5 for 25490772	mtr-u.5 for 11446478	mtr-u.5 for 11445181	sly-u.5 for 101264401	sly-u.5 for 101256941	sot-r.1 for 102597419	sot-r.1 for 102590298	sot-r.1 for 102590781	nta-r.1 for 107764046	nta-r.1 for 107773508	nta-r.1 for 107777308	osa-u.5 for 4339029	osa-u.5 for 4347135	osa-u.5 for 4347799	zma-u.5 for 103631010	zma-u.5 for 103633139	zma-u.5 for 103636523	tae-r.2 for 123087709	tae-r.2 for 123051161	tae-r.2 for 123104715	hvu-r.1 for 123400672	hvu-r.1 for 123397931	sbi-r.1 for 8058810	sbi-r.1 for 8056567	sbi-r.1 for 8056569	bdi-r.1 for 100845838	bdi-r.1 for 104584388	bdi-r.1 for 100845127	cre-r.1 for CHLRE_06g266600v5	cre-r.1 for CHLRE_06g265450v5	cre-r.1 for CHLRE_06g265200v5

Ortholog

Ortholog ID: 87

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

HIS4

Function^*

histone H4

Histone superfamily protein

histone H4

uncharacterized LOC107932445

histone H4

uncharacterized LOC100244527

histone H4

uncharacterized LOC102605056

histone H4

uncharacterized LOC100278340

histone H4

uncharacterized protein

Coexmap

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Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03082	ATP-dependent chromatin remodeling	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03082	ATP-dependent chromatin remodeling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03082	ATP-dependent chromatin remodeling	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03082	ATP-dependent chromatin remodeling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03082	ATP-dependent chromatin remodeling	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03082	ATP-dependent chromatin remodeling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03082	ATP-dependent chromatin remodeling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03082	ATP-dependent chromatin remodeling	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03082	ATP-dependent chromatin remodeling	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03082	ATP-dependent chromatin remodeling	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00240	Pyrimidine metabolism	3
vvi01232	Nucleotide metabolism	3
vvi03030	DNA replication	2
vvi03420	Nucleotide excision repair	2
vvi03430	Mismatch repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03082	ATP-dependent chromatin remodeling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03082	ATP-dependent chromatin remodeling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00240	Pyrimidine metabolism	2
ppo01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00240	Pyrimidine metabolism	2
ppo01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03082	ATP-dependent chromatin remodeling	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03082	ATP-dependent chromatin remodeling	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03082	ATP-dependent chromatin remodeling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03082	ATP-dependent chromatin remodeling	5
sot03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00240	Pyrimidine metabolism	2
sot01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03082	ATP-dependent chromatin remodeling	2
sot03440	Homologous recombination	2
sot03460	Fanconi anemia pathway	2
sot03030	DNA replication	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03082	ATP-dependent chromatin remodeling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03082	ATP-dependent chromatin remodeling	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03082	ATP-dependent chromatin remodeling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03082	ATP-dependent chromatin remodeling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04120	Ubiquitin mediated proteolysis	2
sbi03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03082	ATP-dependent chromatin remodeling	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03082	ATP-dependent chromatin remodeling	4
sbi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03082	ATP-dependent chromatin remodeling	2
bdi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04144	Endocytosis	2

Expression

Expression pattern

Entrez Gene ID^*

106447366

106437381

106347525

103829765

103865608

103841295

837279

836119

817423

107932686

107959073

107932445

102629767

102614670

102630591

100804633

100800769

100793106

100267358

100263191

100244527

18099206

18099209

18100499

25497863

11433555

11440148

101264401

101252889

102597419

102605372

102605056

107777308

107816714

107798291

4339029

9270544

4349248

103636523

100278340

103633162

123041830

123065861

123046420

123401490

123413523

123445002

8061791

8077977

8060296

100845838

100843591

100823315

66053633

66055937

5716482

The preparation time of this page was 0.2 [sec].


Species	bna	bra	ath	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	2	3	3	3	3	3	3	3	2	3	3	3	3	3	2	3	3	3

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 106446920 (bna-r.1 coexpression data)

Top 50 enrichment test to 106446920 (bna-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**