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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106451908   zinc finger CCCH domain-containing protein 19 
 ath-u.5   AT3G19080   SWIB complex BAF60b domain-containing protein 
 ath-u.5   AT1G49520   SWIB complex BAF60b domain-containing protein 
 gma-u.5   100786835   upstream activation factor subunit spp27 
 gma-u.5   100784838   upstream activation factor subunit spp27 
 vvi-u.5   100852962   upstream activation factor subunit spp27 
 ppo-u.5   7480496   protein TRI1 
 ppo-u.5   7490004   protein TRI1 
 ppo-u.5   18097831   protein TRI1 
 mtr-u.5   11421065   upstream activation factor subunit spp27 
 sly-u.5   101263870   protein TRI1-like 
 sly-u.5   101243645   SWIB/MDM2 domain-containing protein 
 osa-u.5   107275975   upstream activation factor subunit spp27 
 zma-u.5   100281818   uncharacterized LOC100281818 
 zma-u.5   100281035   uncharacterized LOC100281035 

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Top 50 coexpressed genes to 106451908 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106451908 (bna-r.1 coexpression data)

CoexMap"106451908"


bnaLOC106451908 | Entrez gene ID : 106451908    
Species bna ath gma vvi ppo mtr sly osa zma hvu sot tae nta bra cit ghi bdi sbi cre
Paralog 1 2 2 1 3 1 2 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
Protein XP_048635572.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  cyto 1,  chlo 1,  cysk 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_048635572.1)
Subcellular
localization
TargetP
other 8  (predict for XP_048635572.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106451908

.
ath-u.5
for
AT3G19080

.
ath-u.5
for
AT1G49520

.
gma-u.5
for
100786835

.
gma-u.5
for
100784838

.
vvi-u.5
for
100852962

.
ppo-u.5
for
7480496

.
ppo-u.5
for
7490004

.
ppo-u.5
for
18097831

.
mtr-u.5
for
11421065

.
sly-u.5
for
101263870

.
sly-u.5
for
101243645

.
osa-u.5
for
107275975

.
zma-u.5
for
100281818

.
zma-u.5
for
100281035

.


Ortholog ID: 5521
Species ath ath gma gma sly sly osa zma zma bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit cit bdi nta nta
Symbol AT1G49520 AT3G19080 LOC100786835 LOC100784838 LOC101243645 LOC101263870 LOC107275975 LOC100281035 LOC100281818 LOC103869495 LOC100852962 LOC18097831 LOC7480496 LOC11421065 LOC123105128 LOC123113420 LOC123452374 LOC107897105 LOC121214848 LOC106410429 LOC106451907 CHLRE_02g118250v5 LOC8086192 LOC102599905 LOC102611580 LOC102610327 LOC100831587 LOC107776037 LOC107808356
Function* SWIB complex BAF60b domain-containing protein SWIB complex BAF60b domain-containing protein upstream activation factor subunit spp27 upstream activation factor subunit spp27 SWIB/MDM2 domain-containing protein protein TRI1-like upstream activation factor subunit spp27 uncharacterized LOC100281035 uncharacterized LOC100281818 uncharacterized LOC103869495 upstream activation factor subunit spp27 protein TRI1 protein TRI1 upstream activation factor subunit spp27 upstream activation factor subunit spp27 upstream activation factor subunit spp27 upstream activation factor subunit spp27-like upstream activation factor subunit UAF30 trichohyalin uncharacterized LOC106410429 zinc finger CCCH domain-containing protein 19-like uncharacterized protein upstream activation factor subunit spp27 upstream activation factor subunit spp27-like protein TRI1 upstream activation factor subunit spp27-like upstream activation factor subunit spp27 uncharacterized LOC107776037 upstream activation factor subunit UAF30-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 9
zma03015 mRNA surveillance pathway 3
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra04120 Ubiquitin mediated proteolysis 3
bra03013 Nucleocytoplasmic transport 2
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00260 Glycine, serine and threonine metabolism 2
tae00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 3
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 4
bna03015 mRNA surveillance pathway 4
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 4
bna03015 mRNA surveillance pathway 4
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 5
sbi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04626 Plant-pathogen interaction 2
sot04130 SNARE interactions in vesicular transport 2
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00260 Glycine, serine and threonine metabolism 5
nta00290 Valine, leucine and isoleucine biosynthesis 5
nta01200 Carbon metabolism 5
nta01230 Biosynthesis of amino acids 5
nta00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841376 821442 100786835 100784838 101243645 101263870 107275975 100281035 100281818 103869495 100852962 18097831 7480496 11421065 123105128 123113420 123452374 107897105 121214848 106410429 106451907 5727990 8086192 102599905 102611580 102610327 100831587 107776037 107808356
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