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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106452014   nuclear exosome regulator NRDE2 
 ath-u.5   AT3G17740   uncharacterized protein 
 ath-u.5   AT3G17712   uncharacterized protein 
 gma-u.5   100812285   nuclear exosome regulator NRDE2 
 gma-u.5   100786596   nuclear exosome regulator NRDE2 
 vvi-u.5   100255247   uncharacterized LOC100255247 
 ppo-u.5   18105579   uncharacterized LOC18105579 
 mtr-u.5   11415298   nuclear exosome regulator NRDE2 
 sly-u.5   101265113   uncharacterized LOC101265113 
 osa-u.5   4330879   uncharacterized LOC4330879 
 zma-u.5   100274011   uncharacterized LOC100274011 

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Top 50 coexpressed genes to 106452014 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106452014 (bna-r.1 coexpression data)

CoexMap"106452014"


bnaLOC106452014 | Entrez gene ID : 106452014    
Species bna ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae ghi
Paralog 1 2 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:1902369 [list] [network] negative regulation of RNA catabolic process  (9 genes)  IEA  
GO:0035194 [list] [network] regulatory ncRNA-mediated post-transcriptional gene silencing  (32 genes)  IEA  
GO:0006396 [list] [network] RNA processing  (1786 genes)  IEA  
GO CC
GO:0071013 [list] [network] catalytic step 2 spliceosome  (222 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (12789 genes)  IEA  
Protein XP_013749475.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_013749475.2)
Subcellular
localization
TargetP
other 5,  chlo 3  (predict for XP_013749475.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106452014

.
ath-u.5
for
AT3G17740

.
ath-u.5
for
AT3G17712

.
gma-u.5
for
100812285

.
gma-u.5
for
100786596

.
vvi-u.5
for
100255247

.
ppo-u.5
for
18105579

.
mtr-u.5
for
11415298

.
sly-u.5
for
101265113

.
osa-u.5
for
4330879

.
zma-u.5
for
100274011

.


Ortholog ID: 8944
Species ath ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT3G17740 AT3G17712 LOC100786596 LOC100812285 LOC101265113 LOC4330879 LOC100274011 LOC103869658 LOC100255247 LOC18105579 LOC11415298 LOC123138386 LOC123145640 LOC123404721 LOC107887131 LOC107908438 LOC106452014 LOC106435958 CHLRE_13g589650v5 LOC8075217 LOC102606398 LOC102625661 LOC100822966 LOC107786802 LOC107785207
Function* uncharacterized protein uncharacterized protein nuclear exosome regulator NRDE2 nuclear exosome regulator NRDE2 uncharacterized LOC101265113 uncharacterized LOC4330879 uncharacterized LOC100274011 nuclear exosome regulator NRDE2 uncharacterized LOC100255247 uncharacterized LOC18105579 nuclear exosome regulator NRDE2 nuclear exosome regulator NRDE2 nuclear exosome regulator NRDE2 nuclear exosome regulator NRDE2 nuclear exosome regulator NRDE2 nuclear exosome regulator NRDE2 nuclear exosome regulator NRDE2 nuclear exosome regulator NRDE2-like uncharacterized protein protein NRDE2 homolog protein NRDE2 homolog uncharacterized LOC102625661 protein NRDE2 homolog uncharacterized LOC107786802 uncharacterized LOC107785207
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 2
ath03083 Polycomb repressive complex 2
ath03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 3
sly03083 Polycomb repressive complex 2
sly03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 2
bra03420 Nucleotide excision repair 2
bra04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 3
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00450 Selenocompound metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04148 Efferocytosis 2
bna04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 3
bna04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
sbi00020 Citrate cycle (TCA cycle) 2
sbi00785 Lipoic acid metabolism 2
sbi01200 Carbon metabolism 2
sbi01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
nta04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
nta04814 Motor proteins 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821042 7922332 100786596 100812285 101265113 4330879 100274011 103869658 100255247 18105579 11415298 123138386 123145640 123404721 107887131 107908438 106452014 106435958 66056064 8075217 102606398 102625661 100822966 107786802 107785207
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