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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106453051   cell cycle checkpoint control protein RAD9A 
 ath-u.5   RAD9   cell cycle checkpoint control protein family 
 gma-u.5   100819112   cell cycle checkpoint control protein RAD9A 
 vvi-u.5   100264904   uncharacterized LOC100264904 
 ppo-u.5   7481737   uncharacterized LOC7481737 
 mtr-u.5   11421369   cell cycle checkpoint control protein RAD9A 
 sly-u.5   101259988   uncharacterized LOC101259988 
 osa-u.5   4332812   uncharacterized LOC4332812 
 zma-u.5   100283409   auxin response factor 75 

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Top 50 coexpressed genes to 106453051 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106453051 (bna-r.1 coexpression data)

CoexMap"106453051"


bnaLOC106453051 | Entrez gene ID : 106453051    
Species bna ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae ghi
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0071479 [list] [network] cellular response to ionizing radiation  (5 genes)  IEA  
GO:0031573 [list] [network] mitotic intra-S DNA damage checkpoint signaling  (9 genes)  IEA  
GO:0000076 [list] [network] DNA replication checkpoint signaling  (35 genes)  IEA  
GO:0006281 [list] [network] DNA repair  (1192 genes)  IEA  
GO CC
GO:0030896 [list] [network] checkpoint clamp complex  (7 genes)  IEA  
GO MF
Protein XP_013750727.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  mito 2,  chlo 1,  cyto 1,  cysk 1  (predict for XP_013750727.1)
Subcellular
localization
TargetP
mito 3  (predict for XP_013750727.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106453051

.
ath-u.5
for
RAD9

.
gma-u.5
for
100819112

.
vvi-u.5
for
100264904

.
ppo-u.5
for
7481737

.
mtr-u.5
for
11421369

.
sly-u.5
for
101259988

.
osa-u.5
for
4332812

.
zma-u.5
for
100283409

.


Ortholog ID: 9450
Species ath gma sly osa zma bra vvi ppo mtr tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol RAD9 LOC100819112 LOC101259988 LOC4332812 LOC100283409 LOC103870819 LOC100264904 LOC7481737 LOC11421369 LOC123085847 LOC123448627 LOC107942221 LOC107927183 LOC106453051 LOC125609133 CHLRE_16g682950v5 LOC8082301 LOC102593069 LOC102611453 LOC100841158 LOC107798041 LOC107806587
Function* cell cycle checkpoint control protein family cell cycle checkpoint control protein RAD9A uncharacterized LOC101259988 uncharacterized LOC4332812 auxin response factor 75 cell cycle checkpoint control protein RAD9A uncharacterized LOC100264904 uncharacterized LOC7481737 cell cycle checkpoint control protein RAD9A cell cycle checkpoint control protein RAD9B cell cycle checkpoint control protein RAD9B cell cycle checkpoint control protein RAD9A cell cycle checkpoint control protein RAD9A cell cycle checkpoint control protein RAD9A cell cycle checkpoint control protein RAD9A-like uncharacterized protein cell cycle checkpoint control protein RAD9A cell cycle checkpoint control protein RAD9A uncharacterized LOC102611453 cell cycle checkpoint control protein RAD9A uncharacterized LOC107798041 uncharacterized LOC107806587
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03460 Fanconi anemia pathway 3
ath03440 Homologous recombination 3
ath03030 DNA replication 3
ath03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03410 Base excision repair 2
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
osa03040 Spliceosome 2
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03460 Fanconi anemia pathway 2
bra04814 Motor proteins 2
bra03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 3
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03030 DNA replication 4
ppo03410 Base excision repair 2
ppo03420 Nucleotide excision repair 2
ppo03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 3
mtr03430 Mismatch repair 3
mtr03410 Base excision repair 2
mtr03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 7
ghi03420 Nucleotide excision repair 7
ghi03430 Mismatch repair 7
ghi03410 Base excision repair 4
ghi03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 7
ghi03420 Nucleotide excision repair 7
ghi03430 Mismatch repair 7
ghi03410 Base excision repair 4
ghi03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 8
bna03430 Mismatch repair 6
bna03018 RNA degradation 4
bna03410 Base excision repair 3
bna03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 8
bna03430 Mismatch repair 5
bna03018 RNA degradation 4
bna03410 Base excision repair 3
bna03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 4
cre03410 Base excision repair 3
cre03420 Nucleotide excision repair 3
cre03430 Mismatch repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 4
nta03015 mRNA surveillance pathway 4
nta00790 Folate biosynthesis 2
nta00730 Thiamine metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00730 Thiamine metabolism 2
nta01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 819713 100819112 101259988 4332812 100283409 103870819 100264904 7481737 11421369 123085847 123448627 107942221 107927183 106453051 125609133 5717589 8082301 102593069 102611453 100841158 107798041 107806587
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