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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102620424   F-box/LRR-repeat protein At5g63520 
 ath-u.5   AT5G63520   F-box/LRR protein 
 bra-r.6   103873763   F-box/LRR-repeat protein At5g63520 
 bra-r.6   103855051   F-box/LRR-repeat protein At5g63520 
 ghi-r.1   107950180   F-box/LRR-repeat protein At5g63520 
 ghi-r.1   107886239   F-box/LRR-repeat protein At5g63520 
 ghi-r.1   107886237   F-box/LRR-repeat protein At5g63520 
 bna-r.1   106405274   F-box/LRR-repeat protein At5g63520 
 bna-r.1   125575619   F-box/LRR-repeat protein At5g63520-like 
 bna-r.1   106382904   F-box/LRR-repeat protein At5g63520 
 gma-u.5   100815778   F-box/LRR-repeat protein At5g63520 
 gma-u.5   100786866   F-box/LRR-repeat protein At5g63520 
 vvi-u.5   100262924   F-box/LRR-repeat protein At5g63520 
 ppo-u.5   7454732   F-box/LRR-repeat protein At5g63520 
 ppo-u.5   7463137   F-box/LRR-repeat protein At5g63520 
 mtr-u.5   11431237   F-box/LRR-repeat protein At5g63520 
 sly-u.5   101264813   F-box/LRR-repeat protein At5g63520 
 sly-u.5   101264509   F-box/LRR-repeat protein At5g63520-like 
 sly-u.5   101253141   F-box/LRR-repeat protein At5g63520 
 sot-r.1   102581112   F-box/LRR-repeat protein At5g63520-like 
 sot-r.1   102584415   F-box/LRR-repeat protein At5g63520-like 
 sot-r.1   102599495   F-box/LRR-repeat protein At5g63520-like 
 nta-r.1   107827695   F-box/LRR-repeat protein At5g63520-like 
 nta-r.1   107814922   F-box/LRR-repeat protein At5g63520 
 nta-r.1   107782358   F-box/LRR-repeat protein At5g63520-like 

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Top 50 coexpressed genes to 102620424 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102620424 (cit-r.1 coexpression data)

CoexMap"107174553"


citLOC107174553 | Entrez gene ID : 107174553    
Species cit ath bra ghi bna gma vvi ppo mtr sly sot nta cre hvu tae bdi osa zma sbi
Paralog 1 1 2 3 3 2 1 2 1 3 3 3 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0032436 [list] [network] positive regulation of proteasomal ubiquitin-dependent protein catabolic process  (31 genes)  IEA  
GO:0000209 [list] [network] protein polyubiquitination  (64 genes)  IEA  
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (3939 genes)  IEA  
Protein XP_024949201.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 4,  vacu 1,  cysk 1,  golg 1  (predict for XP_024949201.1)
Subcellular
localization
TargetP
other 4  (predict for XP_024949201.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102620424
ath-u.5
for
AT5G63520
bra-r.6
for
103873763
bra-r.6
for
103855051
ghi-r.1
for
107950180
ghi-r.1
for
107886239
ghi-r.1
for
107886237
bna-r.1
for
106405274
bna-r.1
for
125575619
bna-r.1
for
106382904
gma-u.5
for
100815778
gma-u.5
for
100786866
vvi-u.5
for
100262924
ppo-u.5
for
7454732
ppo-u.5
for
7463137
mtr-u.5
for
11431237
sly-u.5
for
101264813
sly-u.5
for
101264509
sly-u.5
for
101253141
sot-r.1
for
102581112
sot-r.1
for
102584415
sot-r.1
for
102599495
nta-r.1
for
107827695
nta-r.1
for
107814922
nta-r.1
for
107782358


Ortholog ID: 5604
Species cit ath bra bra ghi ghi ghi bna bna bna gma gma vvi ppo mtr sly sly sly sot sot sot nta nta nta
Symbol LOC102620424 AT5G63520 LOC103873763 LOC103855051 LOC107950180 LOC107886237 LOC107941241 LOC106382904 LOC106348354 LOC106347916 LOC100815778 LOC100786866 LOC100262924 LOC7454732 LOC11431237 LOC101264813 LOC101264509 LOC101253141 LOC102581112 LOC102584415 LOC102599495 LOC107827695 LOC107814922 LOC107782358
Function* F-box/LRR-repeat protein At5g63520 F-box/LRR protein F-box/LRR-repeat protein At5g63520 F-box/LRR-repeat protein At5g63520 F-box/LRR-repeat protein At5g63520 F-box/LRR-repeat protein At5g63520 F-box/LRR-repeat protein At5g63520 F-box/LRR-repeat protein At5g63520 F-box/LRR-repeat protein At5g63520-like F-box/LRR-repeat protein At5g63520-like F-box/LRR-repeat protein At5g63520 F-box/LRR-repeat protein At5g63520 F-box/LRR-repeat protein At5g63520 F-box/LRR-repeat protein At5g63520 F-box/LRR-repeat protein At5g63520 F-box/LRR-repeat protein At5g63520 F-box/LRR-repeat protein At5g63520-like F-box/LRR-repeat protein At5g63520 F-box/LRR-repeat protein At5g63520-like F-box/LRR-repeat protein At5g63520-like F-box/LRR-repeat protein At5g63520-like F-box/LRR-repeat protein At5g63520-like F-box/LRR-repeat protein At5g63520 F-box/LRR-repeat protein At5g63520-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00760 Nicotinate and nicotinamide metabolism 2
cit01240 Biosynthesis of cofactors 2
cit03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00280 Valine, leucine and isoleucine degradation 2
ghi00410 beta-Alanine metabolism 2
ghi00640 Propanoate metabolism 2
ghi01200 Carbon metabolism 2
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna02010 ABC transporters 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03460 Fanconi anemia pathway 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00260 Glycine, serine and threonine metabolism 2
sot00470 D-Amino acid metabolism 2
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102620424 836471 103873763 103855051 107950180 107886237 107941241 106382904 106348354 106347916 100815778 100786866 100262924 7454732 11431237 101264813 101264509 101253141 102581112 102584415 102599495 107827695 107814922 107782358
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