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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5   4334324   transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 13-like 
 osa-u.5   4342383   transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 13-like 
 zma-u.5   103654692   transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 13 
 zma-u.5   103636724   transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 13 
 tae-r.2   123052879   transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 13 
 tae-r.2   123188770   transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 13 
 tae-r.2   123123081   transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 13 
 hvu-r.1   123426286   transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 13-like 
 hvu-r.1   123452543   transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 13-like 
 sbi-r.1   8084151   transcription factor PIF5 
 sbi-r.1   8086399   transcription factor PIF5 
 bdi-r.1   100831583   transcription factor PIF5 
 bdi-r.1   100831206   transcription factor PIF4 

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Top 50 coexpressed genes to 4334324 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4334324 (osa-u.5 coexpression data)

CoexMap"107175605"


citLOC107175605 | Entrez gene ID : 107175605    
Species osa zma tae hvu sbi bdi sly nta ghi vvi gma ppo bna sot ath cit mtr cre bra
Paralog 2 2 3 2 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cit04075 [list] [network] Plant hormone signal transduction (346 genes)
cit04712 [list] [network] Circadian rhythm - plant (44 genes)
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1325 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2569 genes)  IEA  
GO MF
GO:0046983 [list] [network] protein dimerization activity  (408 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (825 genes)  IEA  
Protein XP_024950357.1 [sequence] [blastp]
XP_052291524.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_024950357.1)
nucl 10  (predict for XP_052291524.1)
Subcellular
localization
TargetP
chlo 5,  other 4  (predict for XP_024950357.1)
chlo 5,  other 4  (predict for XP_052291524.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.5
for
4334324
osa-u.5
for
4342383
zma-u.5
for
103654692
zma-u.5
for
103636724
tae-r.2
for
123052879
tae-r.2
for
123188770
tae-r.2
for
123123081
hvu-r.1
for
123426286
hvu-r.1
for
123452543
sbi-r.1
for
8084151
sbi-r.1
for
8086399
bdi-r.1
for
100831583
bdi-r.1
for
100831206


Ortholog ID: 12534
Species osa osa zma zma tae tae tae hvu hvu sbi sbi bdi bdi
Symbol LOC4334324 LOC4342383 LOC103654692 LOC100384229 LOC123188770 LOC123113548 LOC123105284 LOC123426286 LOC123452543 LOC8084151 LOC8086399 LOC100831583 LOC100831206
Function* transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 13-like transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 13-like transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 13 transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 13 transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 13 transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 13 transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 13 transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 13-like transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 13-like transcription factor PIF5 transcription factor PIF5 transcription factor PIF5 transcription factor PIF4
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
tae00562 Inositol phosphate metabolism 2
tae04070 Phosphatidylinositol signaling system 2
tae04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04146 Peroxisome 4
tae04075 Plant hormone signal transduction 3
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04146 Peroxisome 4
tae04075 Plant hormone signal transduction 3
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00196 Photosynthesis - antenna proteins 4
bdi00561 Glycerolipid metabolism 3
bdi00860 Porphyrin metabolism 2
bdi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4334324 4342383 103654692 100384229 123188770 123113548 123105284 123426286 123452543 8084151 8086399 100831583 100831206
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