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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   121203668   pentatricopeptide repeat-containing protein At5g16860-like 
 ghi-r.1   121203670   pentatricopeptide repeat-containing protein At1g25360-like 
 ghi-r.1   107953280   pentatricopeptide repeat-containing protein At3g49170, chloroplastic 
 vvi-u.5   100261920   pentatricopeptide repeat-containing protein At4g13650 
 osa-u.5   4329542   pentatricopeptide repeat-containing protein At4g13650 
 zma-u.5   103627235   pentatricopeptide repeat-containing protein 
 tae-r.2   123145128   pentatricopeptide repeat-containing protein At3g53360, mitochondrial 
 tae-r.2   123137811   pentatricopeptide repeat-containing protein At3g53360, mitochondrial-like 
 tae-r.2   123128030   pentatricopeptide repeat-containing protein At3g02330, mitochondrial 
 hvu-r.1   123402105   pentatricopeptide repeat-containing protein At3g53360, mitochondrial-like 
 sbi-r.1   8059623   pentatricopeptide repeat-containing protein At3g63370, chloroplastic 
 bdi-r.1   100843382   pentatricopeptide repeat-containing protein At4g39530 

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Top 50 coexpressed genes to 121203668 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 121203668 (ghi-r.1 coexpression data)

CoexMap"107176122"


citLOC107176122 | Entrez gene ID : 107176122    
Species ghi vvi osa zma tae hvu sbi bdi sot sly nta bna ppo cre mtr ath gma bra cit
Paralog 3 1 1 1 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (369 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1117 genes)  IEA  
GO:0005515 [list] [network] protein binding  (3939 genes)  IEA  
Protein XP_052288753.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  cyto 3,  nucl 2,  extr 1,  chlo_mito 1,  nucl_plas 1,  cyto_pero 1,  cyto_E.R. 1  (predict for XP_052288753.1)
Subcellular
localization
TargetP
chlo 9,  other 6  (predict for XP_052288753.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
121203668
ghi-r.1
for
121203670
ghi-r.1
for
107953280
vvi-u.5
for
100261920
osa-u.5
for
4329542
zma-u.5
for
103627235
tae-r.2
for
123145128
tae-r.2
for
123137811
tae-r.2
for
123128030
hvu-r.1
for
123402105
sbi-r.1
for
8059623
bdi-r.1
for
100843382


Ortholog ID: 13850
Species ghi ghi ghi vvi osa zma tae tae tae hvu sbi bdi
Symbol LOC121203668 LOC107953280 LOC107954234 LOC100261920 LOC4329542 LOC103627235 LOC123145128 LOC123137811 LOC123128030 LOC123402105 LOC8059623 LOC100843382
Function* pentatricopeptide repeat-containing protein At5g16860-like pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At3g49170, chloroplastic pentatricopeptide repeat-containing protein At4g13650 pentatricopeptide repeat-containing protein At4g13650 pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At3g53360, mitochondrial pentatricopeptide repeat-containing protein At3g53360, mitochondrial-like pentatricopeptide repeat-containing protein At3g02330, mitochondrial pentatricopeptide repeat-containing protein At3g53360, mitochondrial-like pentatricopeptide repeat-containing protein At3g63370, chloroplastic pentatricopeptide repeat-containing protein At4g39530
Coexmap

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Coexpression

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KEGG Info
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 121203668 107953280 107954234 100261920 4329542 103627235 123145128 123137811 123128030 123402105 8059623 100843382
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