Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   107178029   pentatricopeptide repeat-containing protein At3g56030, mitochondrial-like 
 ath-u.5   AT2G40240   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-u.5   AT3G56030   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ghi-r.1   107903364   pentatricopeptide repeat-containing protein At3g56030, mitochondrial 
 ghi-r.1   121230774   pentatricopeptide repeat-containing protein At3g56030, mitochondrial 
 gma-u.5   100776103   pentatricopeptide repeat-containing protein At2g40240, mitochondrial 
 vvi-u.5   104881091   pentatricopeptide repeat-containing protein At3g56030, mitochondrial 
 ppo-u.5   7457834   pentatricopeptide repeat-containing protein At3g56030, mitochondrial 
 sly-u.5   101255279   pentatricopeptide repeat-containing protein At2g40240, mitochondrial 
 sot-r.1   102606121   pentatricopeptide repeat-containing protein At3g56030 
 nta-r.1   107762812   pentatricopeptide repeat-containing protein At2g40240, mitochondrial-like 
 nta-r.1   107828542   pentatricopeptide repeat-containing protein At2g40240, mitochondrial-like 

close


Top 50 coexpressed genes to 107178029 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 107178029 (cit-r.1 coexpression data)

CoexMap"107178029"


citLOC107178029 | Entrez gene ID : 107178029    
Species cit ath ghi gma vvi ppo sly sot nta bdi osa tae bna zma cre mtr sbi bra hvu
Paralog 1 2 2 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (3939 genes)  IEA  
Protein XP_015388203.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  mito 1,  nucl 1,  extr 1,  cyto_mito 1,  mito_plas 1  (predict for XP_015388203.1)
Subcellular
localization
TargetP
mito 7  (predict for XP_015388203.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
107178029
ath-u.5
for
AT2G40240
ath-u.5
for
AT3G56030
ghi-r.1
for
107903364
ghi-r.1
for
121230774
gma-u.5
for
100776103
vvi-u.5
for
104881091
ppo-u.5
for
7457834
sly-u.5
for
101255279
sot-r.1
for
102606121
nta-r.1
for
107762812
nta-r.1
for
107828542


Ortholog ID: 13424
Species cit ath ath ghi ghi gma vvi ppo sly sot nta nta
Symbol LOC107178029 AT2G40240 AT3G56030 LOC107903364 LOC121230774 LOC100776103 LOC104881091 LOC7457834 LOC101255279 LOC102606121 LOC107762812 LOC107828542
Function* pentatricopeptide repeat-containing protein At3g56030, mitochondrial-like Tetratricopeptide repeat (TPR)-like superfamily protein Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At3g56030, mitochondrial pentatricopeptide repeat-containing protein At3g56030, mitochondrial pentatricopeptide repeat-containing protein At2g40240, mitochondrial pentatricopeptide repeat-containing protein At3g56030, mitochondrial pentatricopeptide repeat-containing protein At3g56030, mitochondrial pentatricopeptide repeat-containing protein At2g40240, mitochondrial pentatricopeptide repeat-containing protein At3g56030 pentatricopeptide repeat-containing protein At2g40240, mitochondrial-like pentatricopeptide repeat-containing protein At2g40240, mitochondrial-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
cit03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00620 Pyruvate metabolism 2
ghi01200 Carbon metabolism 2
ghi01230 Biosynthesis of amino acids 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00620 Pyruvate metabolism 2
ghi01200 Carbon metabolism 2
ghi01230 Biosynthesis of amino acids 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 7
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 10
vvi03008 Ribosome biogenesis in eukaryotes 2
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 2
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107178029 818616 824769 107903364 121230774 100776103 104881091 7457834 101255279 102606121 107762812 107828542
The preparation time of this page was 0.1 [sec].