ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
osa-u.5	107278708	uncharacterized LOC107278708
osa-r.6	107278708	uncharacterized LOC107278708
osa-e.1	107278708	uncharacterized LOC107278708
osa-u.5	4334775	uncharacterized LOC4334775
tae-r.2	123114300	zinc finger CCCH domain-containing protein 18
tae-r.2	123087635	triadin
tae-r.2	123123790	serine/arginine repetitive matrix protein 1
hvu-r.1	123395080	serine/arginine repetitive matrix protein 1-like
hvu-r.1	123407805	uncharacterized protein DDB_G0284459
bdi-r.1	100822097	mediator of RNA polymerase II transcription subunit 1.1
bdi-r.1	100838614	zinc finger CCCH domain-containing protein 13
zma-u.5	103644324	glutamic acid-rich protein
zma-u.5	103627942	uncharacterized protein DDB_G0284459
sbi-r.1	8080156	myb-like protein X
sbi-r.1	8060968	uncharacterized LOC8060968
ath-u.5	AT5G48610	myb-like protein X
gma-u.5	102668076	myb-like protein X
gma-u.5	100787189	myb-like protein X
gma-u.5	100778584	myb-like protein X
sly-u.5	101260029	uncharacterized LOC101260029
sly-u.5	101256675	uncharacterized LOC101256675
bra-r.6	103849388	glutamic acid-rich protein
bra-r.6	103870683	DNA ligase 1
bra-r.6	103859209	myb-like protein X
vvi-u.5	100250375	uncharacterized LOC100250375
vvi-u.5	100245554	uncharacterized LOC100245554
ppo-u.5	18107091	uncharacterized LOC18107091
ppo-u.5	18107093	uncharacterized LOC18107093
mtr-u.5	11411351	DNA ligase 1
mtr-u.5	112419799	myb-like protein X
ghi-r.1	107914738	glutamic acid-rich protein
ghi-r.1	107915113	splicing regulatory glutamine/lysine-rich protein 1
ghi-r.1	107939143	myb-like protein X
bna-r.1	106349001	TRAF3-interacting protein 1
bna-r.1	125601819	TRAF3-interacting protein 1-like
bna-r.1	106388908	myb-like protein X
sot-r.1	102581845	myb-like protein X
sot-r.1	102602389	transcription initiation factor TFIID subunit 3-like
cit-r.1	102622758	uncharacterized LOC102622758
cit-r.1	102623498	uncharacterized LOC102623498
nta-r.1	107767395	uncharacterized LOC107767395
nta-r.1	107770135	uncharacterized LOC107770135
nta-r.1	107808027	uncharacterized LOC107808027

Top 50 coexpressed genes to 107278708 (osa-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107278708 (osa-u.5 coexpression data)

CoexMap"107278708"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_015650613.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9, plas 1, cysk 1, cysk_plas 1

(predict for XP_015650613.1)

Subcellular
localization
TargetP

other 8

(predict for XP_015650613.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	osa-u.5 for 107278708	osa-r.6 for 107278708	osa-e.1 for 107278708	osa-u.5 for 4334775	tae-r.2 for 123114300	tae-r.2 for 123087635	tae-r.2 for 123123790	hvu-r.1 for 123395080	hvu-r.1 for 123407805	bdi-r.1 for 100822097	bdi-r.1 for 100838614	zma-u.5 for 103644324	zma-u.5 for 103627942	sbi-r.1 for 8080156	sbi-r.1 for 8060968	ath-u.5 for AT5G48610	gma-u.5 for 102668076	gma-u.5 for 100787189	gma-u.5 for 100778584	sly-u.5 for 101260029	sly-u.5 for 101256675	bra-r.6 for 103849388	bra-r.6 for 103870683	bra-r.6 for 103859209	vvi-u.5 for 100250375	vvi-u.5 for 100245554	ppo-u.5 for 18107091	ppo-u.5 for 18107093	mtr-u.5 for 11411351	mtr-u.5 for 112419799	ghi-r.1 for 107914738	ghi-r.1 for 107915113	ghi-r.1 for 107939143	bna-r.1 for 106349001	bna-r.1 for 125601819	bna-r.1 for 106388908	sot-r.1 for 102581845	sot-r.1 for 102602389	cit-r.1 for 102622758	cit-r.1 for 102623498	nta-r.1 for 107767395	nta-r.1 for 107770135	nta-r.1 for 107808027

Ortholog

Ortholog ID: 2508

Species

osa

tae

hvu

bdi

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

uncharacterized LOC107278708

uncharacterized LOC4334775

zinc finger CCCH domain-containing protein 18

triadin

TRAF3-interacting protein 1

serine/arginine repetitive matrix protein 1-like

uncharacterized protein DDB_G0284459

mediator of RNA polymerase II transcription subunit 1.1

zinc finger CCCH domain-containing protein 13

glutamic acid-rich protein

uncharacterized protein DDB_G0284459

myb-like protein X

uncharacterized LOC8060968

myb-like protein X

uncharacterized LOC101260029

uncharacterized LOC101256675

glutamic acid-rich protein

myb-like protein X

TRAF3-interacting protein 1

uncharacterized LOC100250375

uncharacterized LOC100245554

uncharacterized LOC7495842

DEAD-box ATP-dependent RNA helicase 42

DNA ligase 1

myb-like protein X

DEAD-box ATP-dependent RNA helicase 42

myb-like protein X

TRAF3-interacting protein 1-like

glutamic acid-rich protein-like

myb-like protein X

transcription initiation factor TFIID subunit 3-like

uncharacterized LOC102622758

uncharacterized LOC102623498

uncharacterized LOC107770135

uncharacterized LOC107808027

uncharacterized LOC107808026

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03420	Nucleotide excision repair	2
osa03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00562	Inositol phosphate metabolism	3
tae04070	Phosphatidylinositol signaling system	3
tae04145	Phagosome	3
tae04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03040	Spliceosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	6
ath03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	2
bra03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	4
vvi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03013	Nucleocytoplasmic transport	3
mtr03040	Spliceosome	3
mtr03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03008	Ribosome biogenesis in eukaryotes	2
cit03040	Spliceosome	2

Expression

Expression pattern

Entrez Gene ID^*

107278708

4334775

123114300

123087635

123151642

123395080

123407805

100822097

100838614

103644324

103627942

8080156

8060968

834918

102668076

100778584

101260029

101256675

103849388

103859209

103874971

100250375

100245554

7495842

7495841

11411351

112419799

107939143

107934478

107890498

125601819

111206244

106389014

102581845

102602389

102622758

102623498

107770135

107808027

107808026

The preparation time of this page was 0.2 [sec].


Species	osa	tae	hvu	bdi	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	4	3	2	2	2	2	1	3	2	3	2	2	2	3	3	2	2	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107278708 (osa-u.5 coexpression data)

Top 50 enrichment test to 107278708 (osa-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**