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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1  107759510  DExH-box ATP-dependent RNA helicase DExH5, mitochondrial 
 nta-r.1  107807203  DExH-box ATP-dependent RNA helicase DExH3 
 nta-r.1  107765398  DExH-box ATP-dependent RNA helicase DExH3 
 nta-r.1  107763499  DExH-box ATP-dependent RNA helicase DExH5, mitochondrial 
 sly-u.5  101263393  DExH-box ATP-dependent RNA helicase DExH3 
 sly-u.5  101261705  DExH-box ATP-dependent RNA helicase DExH5, mitochondrial 
 sot-r.1  102586003  ATP-dependent RNA helicase DHX36 
 sot-r.1  102604132  ATP-dependent RNA helicase DHX36 
 ath-u.5  AT2G01130  DEA(D/H)-box RNA helicase family protein 
 ath-u.5  AT1G48650  DEA(D/H)-box RNA helicase family protein 
 gma-u.5  100808902  DExH-box ATP-dependent RNA helicase DExH5, mitochondrial 
 gma-u.5  100806141  DExH-box ATP-dependent RNA helicase DExH3 
 gma-u.5  100798684  DExH-box ATP-dependent RNA helicase DExH5, mitochondrial 
 bra-r.6  103827605  DExH-box ATP-dependent RNA helicase DExH5, mitochondrial 
 bra-r.6  103871455  DExH-box ATP-dependent RNA helicase DExH3 
 vvi-u.5  100244105  DExH-box ATP-dependent RNA helicase DExH3 
 vvi-u.5  100264518  DExH-box ATP-dependent RNA helicase DExH5, mitochondrial 
 ppo-u.5  7453895  DExH-box ATP-dependent RNA helicase DExH3 
 ppo-u.5  7459805  DExH-box ATP-dependent RNA helicase DExH5, mitochondrial 
 mtr-u.5  11410150  DExH-box ATP-dependent RNA helicase DExH3 
 mtr-u.5  25485451  DExH-box ATP-dependent RNA helicase DExH5, mitochondrial 
 ghi-r.1  107923888  DExH-box ATP-dependent RNA helicase DExH3 
 ghi-r.1  107909540  DExH-box ATP-dependent RNA helicase DExH5, mitochondrial 
 ghi-r.1  107904655  DExH-box ATP-dependent RNA helicase DExH3 
 bna-r.1  111216220  DExH-box ATP-dependent RNA helicase DExH3 
 bna-r.1  106401467  DExH-box ATP-dependent RNA helicase DExH5, mitochondrial 
 bna-r.1  125601278  DExH-box ATP-dependent RNA helicase DExH5, mitochondrial-like 
 cit-r.1  102617632  DExH-box ATP-dependent RNA helicase DExH5, mitochondrial 
 cit-r.1  102628100  DExH-box ATP-dependent RNA helicase DExH3 
 osa-u.5  4326075  DExH-box ATP-dependent RNA helicase DExH3 
 zma-u.5  103649879  DExH-box ATP-dependent RNA helicase DExH3 
 tae-r.2  123059825  DExH-box ATP-dependent RNA helicase DExH3 
 tae-r.2  123068291  DExH-box ATP-dependent RNA helicase DExH3 
 hvu-r.1  123442414  DExH-box ATP-dependent RNA helicase DExH3-like 
 sbi-r.1  8070438  DExH-box ATP-dependent RNA helicase DExH3 
 bdi-r.1  100830414  DExH-box ATP-dependent RNA helicase DExH3 

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Top 50 coexpressed genes to 107759510 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107759510 (nta-r.1 coexpression data)

CoexMap"107759510"


ntaLOC107759510 | Entrez gene ID : 107759510
Species nta sly sot ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 4 2 2 2 3 2 2 2 2 3 3 2 1 1 2 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG nta03018 [list] [network] RNA degradation (211 genes)
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (4980 genes)  IEA  
GO:0005622 [list] [network] intracellular anatomical structure  (13807 genes)  IEA  
GO MF
GO:0004386 [list] [network] helicase activity  (420 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (2607 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (3859 genes)  IEA  
Protein XP_016432957.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  nucl 2  (predict for XP_016432957.2)
Subcellular
localization
TargetP
chlo 4  (predict for XP_016432957.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

nta-r.1
for
107759510


nta-r.1
for
107807203


nta-r.1
for
107765398


nta-r.1
for
107763499


sly-u.5
for
101263393


sly-u.5
for
101261705


sot-r.1
for
102586003


sot-r.1
for
102604132


ath-u.5
for
AT2G01130


ath-u.5
for
AT1G48650


gma-u.5
for
100808902


gma-u.5
for
100806141


gma-u.5
for
100798684


bra-r.6
for
103827605


bra-r.6
for
103871455


vvi-u.5
for
100244105


vvi-u.5
for
100264518


ppo-u.5
for
7453895


ppo-u.5
for
7459805


mtr-u.5
for
11410150


mtr-u.5
for
25485451


ghi-r.1
for
107923888


ghi-r.1
for
107909540


ghi-r.1
for
107904655


bna-r.1
for
111216220


bna-r.1
for
106401467


bna-r.1
for
125601278


cit-r.1
for
102617632


cit-r.1
for
102628100


osa-u.5
for
4326075


zma-u.5
for
103649879


tae-r.2
for
123059825


tae-r.2
for
123068291


hvu-r.1
for
123442414


sbi-r.1
for
8070438


bdi-r.1
for
100830414



Ortholog ID: 4849
Species nta nta nta sly sly sot sot ath ath gma gma gma bra bra vvi vvi ppo ppo mtr mtr ghi ghi ghi bna bna bna cit cit osa zma tae tae hvu sbi bdi
Symbol LOC107759510 LOC107765398 LOC107763499 LOC101263393 LOC101261705 LOC102586003 LOC102604132 AT2G01130 AT1G48650 LOC100808902 LOC100798684 LOC100791006 LOC103827605 LOC103871455 LOC100244105 LOC100264518 LOC7453895 LOC7459805 LOC11410150 LOC25485451 LOC107909540 LOC107904655 LOC107886710 LOC111216220 LOC106382089 LOC106349439 LOC102617632 LOC102628100 LOC4326075 LOC103649879 LOC123059825 LOC123068291 LOC123442414 LOC8070438 LOC100830414
Function* DExH-box ATP-dependent RNA helicase DExH5, mitochondrial DExH-box ATP-dependent RNA helicase DExH3 DExH-box ATP-dependent RNA helicase DExH5, mitochondrial DExH-box ATP-dependent RNA helicase DExH3 DExH-box ATP-dependent RNA helicase DExH5, mitochondrial ATP-dependent RNA helicase DHX36 ATP-dependent RNA helicase DHX36 DEA(D/H)-box RNA helicase family protein DEA(D/H)-box RNA helicase family protein DExH-box ATP-dependent RNA helicase DExH5, mitochondrial DExH-box ATP-dependent RNA helicase DExH5, mitochondrial DExH-box ATP-dependent RNA helicase DExH3 DExH-box ATP-dependent RNA helicase DExH5, mitochondrial DExH-box ATP-dependent RNA helicase DExH3 DExH-box ATP-dependent RNA helicase DExH3 DExH-box ATP-dependent RNA helicase DExH5, mitochondrial DExH-box ATP-dependent RNA helicase DExH3 DExH-box ATP-dependent RNA helicase DExH5, mitochondrial DExH-box ATP-dependent RNA helicase DExH3 DExH-box ATP-dependent RNA helicase DExH5, mitochondrial DExH-box ATP-dependent RNA helicase DExH5, mitochondrial DExH-box ATP-dependent RNA helicase DExH3 DExH-box ATP-dependent RNA helicase DExH5, mitochondrial DExH-box ATP-dependent RNA helicase DExH3 DExH-box ATP-dependent RNA helicase DExH3 DExH-box ATP-dependent RNA helicase DExH5, mitochondrial DExH-box ATP-dependent RNA helicase DExH5, mitochondrial DExH-box ATP-dependent RNA helicase DExH3 DExH-box ATP-dependent RNA helicase DExH3 DExH-box ATP-dependent RNA helicase DExH3 DExH-box ATP-dependent RNA helicase DExH3 DExH-box ATP-dependent RNA helicase DExH3 DExH-box ATP-dependent RNA helicase DExH3-like DExH-box ATP-dependent RNA helicase DExH3 DExH-box ATP-dependent RNA helicase DExH3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 2
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 2
sly00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03460 Fanconi anemia pathway 3
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 3
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 2
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03460 Fanconi anemia pathway 2
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 2
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
ghi00480 Glutathione metabolism 2
ghi00196 Photosynthesis - antenna proteins 2
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04148 Efferocytosis 2
ghi03018 RNA degradation 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 3
bna03410 Base excision repair 3
bna03420 Nucleotide excision repair 3
bna03440 Homologous recombination 3
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 3
bna03410 Base excision repair 3
bna03420 Nucleotide excision repair 3
bna03440 Homologous recombination 3
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
cit04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 2
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 2
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 2
sbi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
bdi03008 Ribosome biogenesis in eukaryotes 2
bdi03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107759510 107765398 107763499 101263393 101261705 102586003 102604132 814642 841287 100808902 100798684 100791006 103827605 103871455 100244105 100264518 7453895 7459805 11410150 25485451 107909540 107904655 107886710 111216220 106382089 106349439 102617632 102628100 4326075 103649879 123059825 123068291 123442414 8070438 100830414
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