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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107760421   transcription initiation factor TFIID subunit 12 
 nta-r.1   107829325   transcription initiation factor TFIID subunit 12 
 sly-u.5   101257205   transcription initiation factor TFIID subunit 12 
 sot-r.1   102578266   transcription initiation factor TFIID subunit 12 
 ath-u.5   TAF12   TBP-associated factor 12 
 gma-u.5   100787779   transcription initiation factor TFIID subunit 12 
 gma-u.5   100781682   transcription initiation factor TFIID subunit 12 
 bra-r.6   103870492   transcription initiation factor TFIID subunit 12 
 vvi-u.5   100242486   transcription initiation factor TFIID subunit 12 
 ppo-u.5   7454916   transcription initiation factor TFIID subunit 12 
 mtr-u.5   25483846   transcription initiation factor TFIID subunit 12 
 ghi-r.1   107949460   transcription initiation factor TFIID subunit 12 
 ghi-r.1   107892301   transcription initiation factor TFIID subunit 12 
 bna-r.1   106410271   transcription initiation factor TFIID subunit 12 
 bna-r.1   125587921   transcription initiation factor TFIID subunit 12-like 
 cit-r.1   102608341   transcription initiation factor TFIID subunit 12-like 
 osa-u.5   4325055   transcription initiation factor TFIID subunit 12 
 zma-u.5   103650984   transcription initiation factor TFIID subunit 12 
 tae-r.2   123062663   transcription initiation factor TFIID subunit 12 
 tae-r.2   123071484   transcription initiation factor TFIID subunit 12 
 tae-r.2   123079820   transcription initiation factor TFIID subunit 12 
 hvu-r.1   123444843   transcription initiation factor TFIID subunit 12 
 sbi-r.1   8058943   transcription initiation factor TFIID subunit 12 
 bdi-r.1   100838369   transcription initiation factor TFIID subunit 12 
 bdi-r.1   100821745   transcription initiation factor TFIID subunit 12 
 cre-r.1   CHLRE_12g530700v5   uncharacterized protein 

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Top 50 coexpressed genes to 107760421 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107760421 (nta-r.1 coexpression data)

CoexMap"107760421"


ntaLOC107760421 | Entrez gene ID : 107760421      
Species nta sly sot ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 2 1 1 1 2 1 1 1 1 2 2 1 1 1 3 1 1 2 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG nta03022 [list] [network] Basal transcription factors (87 genes)
GO BP
GO:0051123 [list] [network] RNA polymerase II preinitiation complex assembly  (22 genes)  IEA  
GO:0006352 [list] [network] DNA-templated transcription initiation  (134 genes)  IEA  
GO CC
GO:0000124 [list] [network] SAGA complex  (36 genes)  IEA  
GO:0005669 [list] [network] transcription factor TFIID complex  (39 genes)  IEA  
GO MF
GO:0017025 [list] [network] TBP-class protein binding  (27 genes)  IEA  
GO:0046982 [list] [network] protein heterodimerization activity  (194 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (3714 genes)  IEA  
Protein XP_016433953.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  chlo 2  (predict for XP_016433953.2)
Subcellular
localization
TargetP
chlo 9  (predict for XP_016433953.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107760421
nta-r.1
for
107829325
sly-u.5
for
101257205
sot-r.1
for
102578266
ath-u.5
for
TAF12
gma-u.5
for
100787779
gma-u.5
for
100781682
bra-r.6
for
103870492
vvi-u.5
for
100242486
ppo-u.5
for
7454916
mtr-u.5
for
25483846
ghi-r.1
for
107949460
ghi-r.1
for
107892301
bna-r.1
for
106410271
bna-r.1
for
125587921
cit-r.1
for
102608341
osa-u.5
for
4325055
zma-u.5
for
103650984
tae-r.2
for
123062663
tae-r.2
for
123071484
tae-r.2
for
123079820
hvu-r.1
for
123444843
sbi-r.1
for
8058943
bdi-r.1
for
100838369
bdi-r.1
for
100821745
cre-r.1
for
CHLRE_12g530700v5


Ortholog ID: 9466
Species nta nta sly sot ath gma gma bra vvi ppo mtr ghi ghi bna bna cit osa zma tae tae tae hvu sbi bdi bdi cre
Symbol LOC107760421 LOC107829325 LOC101257205 LOC102578266 TAF12 LOC100787779 LOC100781682 LOC103870492 LOC100242486 LOC7454916 LOC25483846 LOC107949460 LOC107892301 LOC106410271 LOC125587921 LOC102608341 LOC4325055 LOC103650984 LOC123062663 LOC123071484 LOC123079820 LOC123444843 LOC8058943 LOC100838369 LOC100821745 CHLRE_12g530700v5
Function* transcription initiation factor TFIID subunit 12 transcription initiation factor TFIID subunit 12 transcription initiation factor TFIID subunit 12 transcription initiation factor TFIID subunit 12 TBP-associated factor 12 transcription initiation factor TFIID subunit 12 transcription initiation factor TFIID subunit 12 transcription initiation factor TFIID subunit 12 transcription initiation factor TFIID subunit 12 transcription initiation factor TFIID subunit 12 transcription initiation factor TFIID subunit 12 transcription initiation factor TFIID subunit 12 transcription initiation factor TFIID subunit 12 transcription initiation factor TFIID subunit 12 transcription initiation factor TFIID subunit 12-like transcription initiation factor TFIID subunit 12-like transcription initiation factor TFIID subunit 12 transcription initiation factor TFIID subunit 12 transcription initiation factor TFIID subunit 12 transcription initiation factor TFIID subunit 12 transcription initiation factor TFIID subunit 12 transcription initiation factor TFIID subunit 12 transcription initiation factor TFIID subunit 12 transcription initiation factor TFIID subunit 12 transcription initiation factor TFIID subunit 12 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 2
nta03020 RNA polymerase 2
nta03420 Nucleotide excision repair 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
nta03040 Spliceosome 2
nta03083 Polycomb repressive complex 2
nta03022 Basal transcription factors 2
nta03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 5
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 3
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 4
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi03022 Basal transcription factors 2
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 6
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 4
bna03008 Ribosome biogenesis in eukaryotes 4
bna03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 4
bna03008 Ribosome biogenesis in eukaryotes 4
bna03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
cit03015 mRNA surveillance pathway 2
cit03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 5
osa03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03015 mRNA surveillance pathway 3
sbi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 4
bdi03013 Nucleocytoplasmic transport 2
bdi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 2
bdi03015 mRNA surveillance pathway 2
bdi03040 Spliceosome 2
bdi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107760421 107829325 101257205 102578266 820168 100787779 100781682 103870492 100242486 7454916 25483846 107949460 107892301 106410271 125587921 102608341 4325055 103650984 123062663 123071484 123079820 123444843 8058943 100838369 100821745 66055648
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