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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107763693   copper methylamine oxidase-like 
 nta-r.1   107778057   amine oxidase [copper-containing] zeta, peroxisomal-like 
 nta-r.1   107767983   amine oxidase [copper-containing] zeta, peroxisomal 
 nta-r.1   107795029   diamine oxidase [copper-containing] 1, peroxisomal-like 
 sly-u.5   101253199   diamine oxidase [copper-containing] 1, peroxisomal-like 
 sly-u.5   101254319   diamine oxidase [copper-containing] 1, peroxisomal 
 sly-u.5   101266123   amine oxidase [copper-containing] zeta, peroxisomal 
 sot-r.1   102580758   copper methylamine oxidase-like 
 sot-r.1   102584319   copper methylamine oxidase-like 
 ath-u.5   AT2G42490   Copper amine oxidase family protein 
 gma-u.5   PAO1   peroxisomal copper-containing amine oxidase 
 gma-u.5   100778802   copper methylamine oxidase 
 gma-u.5   100783091   copper methylamine oxidase 
 bra-r.6   103865952   copper methylamine oxidase 
 bra-r.6   103858017   copper methylamine oxidase 
 vvi-u.5   100249520   amine oxidase [copper-containing] zeta, peroxisomal 
 vvi-u.5   100267280   amine oxidase [copper-containing] zeta, peroxisomal 
 ppo-u.5   7492380   amine oxidase [copper-containing] zeta, peroxisomal 
 ppo-u.5   7453796   amine oxidase [copper-containing] zeta, peroxisomal 
 ppo-u.5   7458050   diamine oxidase [copper-containing] 1, peroxisomal 
 mtr-u.5   11416558   copper methylamine oxidase 
 mtr-u.5   25501447   copper methylamine oxidase 
 mtr-u.5   11413114   copper methylamine oxidase 
 ghi-r.1   107886210   copper methylamine oxidase 
 ghi-r.1   107922409   copper methylamine oxidase 
 ghi-r.1   107946240   copper methylamine oxidase 
 bna-r.1   106447582   copper methylamine oxidase 
 bna-r.1   106428169   copper methylamine oxidase-like 
 bna-r.1   106391724   copper methylamine oxidase 
 cit-r.1   102610710   amine oxidase [copper-containing] zeta, peroxisomal-like 
 cit-r.1   102618241   amine oxidase [copper-containing] zeta, peroxisomal 
 osa-u.5   4336153   amine oxidase [copper-containing] zeta, peroxisomal 
 zma-u.5   100383438   uncharacterized LOC100383438 
 tae-r.2   123189518   copper methylamine oxidase 
 tae-r.2   123053625   copper methylamine oxidase 
 tae-r.2   123045745   copper methylamine oxidase 
 hvu-r.1   123426997   copper methylamine oxidase-like 
 sbi-r.1   8073581   copper methylamine oxidase 
 sbi-r.1   8063333   copper methylamine oxidase 
 bdi-r.1   100837848   copper methylamine oxidase 
 cre-r.1   CHLRE_01g000650v5   uncharacterized protein 
 cre-r.1   CHLRE_09g402515v5   uncharacterized protein 

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Top 50 coexpressed genes to 107763693 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107763693 (nta-r.1 coexpression data)

CoexMap"107763693"


ntaLOC107763693 | Entrez gene ID : 107763693      
Species nta sly sot ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 4 3 2 1 3 2 2 3 3 3 3 2 1 1 3 1 2 1 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG nta00260 [list] [network] Glycine, serine and threonine metabolism (146 genes)
nta00350 [list] [network] Tyrosine metabolism (83 genes)
nta00360 [list] [network] Phenylalanine metabolism (77 genes)
nta00410 [list] [network] beta-Alanine metabolism (95 genes)
nta00950 [list] [network] Isoquinoline alkaloid biosynthesis (48 genes)
nta00960 [list] [network] Tropane, piperidine and pyridine alkaloid biosynthesis (69 genes)
GO BP
GO:0009308 [list] [network] amine metabolic process  (170 genes)  IEA  
GO CC
GO MF
GO:0008131 [list] [network] primary methylamine oxidase activity  (16 genes)  IEA  
GO:0048038 [list] [network] quinone binding  (20 genes)  IEA  
GO:0005507 [list] [network] copper ion binding  (150 genes)  IEA  
Protein NP_001311739.1 [sequence] [blastp]
XP_016437671.2 [sequence] [blastp]
XP_016437672.2 [sequence] [blastp]
XP_016437673.2 [sequence] [blastp]
XP_016437674.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  nucl 1,  mito 1,  pero 1  (predict for NP_001311739.1)
chlo 8,  nucl 1,  mito 1,  pero 1  (predict for XP_016437671.2)
chlo 8,  nucl 1,  mito 1,  pero 1  (predict for XP_016437672.2)
chlo 9,  nucl 1,  pero 1  (predict for XP_016437673.2)
chlo 9,  pero 1  (predict for XP_016437674.2)
Subcellular
localization
TargetP
chlo 6  (predict for NP_001311739.1)
chlo 6  (predict for XP_016437671.2)
chlo 6  (predict for XP_016437672.2)
chlo 6  (predict for XP_016437673.2)
chlo 6  (predict for XP_016437674.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107763693
nta-r.1
for
107778057
nta-r.1
for
107767983
nta-r.1
for
107795029
sly-u.5
for
101253199
sly-u.5
for
101254319
sly-u.5
for
101266123
sot-r.1
for
102580758
sot-r.1
for
102584319
ath-u.5
for
AT2G42490
gma-u.5
for
PAO1
gma-u.5
for
100778802
gma-u.5
for
100783091
bra-r.6
for
103865952
bra-r.6
for
103858017
vvi-u.5
for
100249520
vvi-u.5
for
100267280
ppo-u.5
for
7492380
ppo-u.5
for
7453796
ppo-u.5
for
7458050
mtr-u.5
for
11416558
mtr-u.5
for
25501447
mtr-u.5
for
11413114
ghi-r.1
for
107886210
ghi-r.1
for
107922409
ghi-r.1
for
107946240
bna-r.1
for
106447582
bna-r.1
for
106428169
bna-r.1
for
106391724
cit-r.1
for
102610710
cit-r.1
for
102618241
osa-u.5
for
4336153
zma-u.5
for
100383438
tae-r.2
for
123189518
tae-r.2
for
123053625
tae-r.2
for
123045745
hvu-r.1
for
123426997
sbi-r.1
for
8073581
sbi-r.1
for
8063333
bdi-r.1
for
100837848
cre-r.1
for
CHLRE_01g000650v5
cre-r.1
for
CHLRE_09g402515v5


Ortholog ID: 2890
Species nta nta nta sly sly sly sot sot ath gma gma gma bra bra vvi vvi ppo ppo ppo mtr mtr mtr ghi ghi ghi bna bna bna cit cit osa zma tae tae tae hvu sbi sbi bdi cre cre
Symbol LOC107778057 LOC107795029 LOC107807126 LOC101253199 LOC101254319 LOC101266123 LOC102580758 LOC102584319 AT2G42490 LOC100778802 LOC100798722 LOC100817454 LOC103865952 LOC103858017 LOC100249520 LOC100267280 LOC7492380 LOC7453796 LOC7458050 LOC11416558 LOC25501447 LOC11413114 LOC107946240 LOC107949638 LOC107928693 LOC106428169 LOC106391724 LOC106388276 LOC102610710 LOC102618241 LOC4336153 LOC100383438 LOC123189518 LOC123053625 LOC123130639 LOC123426997 LOC8073581 LOC8063333 LOC100837848 CHLRE_01g000650v5 CHLRE_09g402515v5
Function* amine oxidase [copper-containing] zeta, peroxisomal-like diamine oxidase [copper-containing] 1, peroxisomal-like copper methylamine oxidase-like diamine oxidase [copper-containing] 1, peroxisomal-like diamine oxidase [copper-containing] 1, peroxisomal amine oxidase [copper-containing] zeta, peroxisomal copper methylamine oxidase-like copper methylamine oxidase-like Copper amine oxidase family protein copper methylamine oxidase copper methylamine oxidase copper methylamine oxidase copper methylamine oxidase copper methylamine oxidase amine oxidase [copper-containing] zeta, peroxisomal amine oxidase [copper-containing] zeta, peroxisomal amine oxidase [copper-containing] zeta, peroxisomal amine oxidase [copper-containing] zeta, peroxisomal diamine oxidase [copper-containing] 1, peroxisomal copper methylamine oxidase copper methylamine oxidase copper methylamine oxidase copper methylamine oxidase copper methylamine oxidase copper methylamine oxidase copper methylamine oxidase-like copper methylamine oxidase copper methylamine oxidase amine oxidase [copper-containing] zeta, peroxisomal-like amine oxidase [copper-containing] zeta, peroxisomal amine oxidase [copper-containing] zeta, peroxisomal uncharacterized LOC100383438 copper methylamine oxidase copper methylamine oxidase copper methylamine oxidase copper methylamine oxidase-like copper methylamine oxidase copper methylamine oxidase copper methylamine oxidase uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00071 Fatty acid degradation 6
nta01212 Fatty acid metabolism 6
nta00592 alpha-Linolenic acid metabolism 4
nta04136 Autophagy - other 3
nta00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00260 Glycine, serine and threonine metabolism 4
nta00350 Tyrosine metabolism 4
nta00360 Phenylalanine metabolism 4
nta00410 beta-Alanine metabolism 4
nta00950 Isoquinoline alkaloid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta02010 ABC transporters 4
nta04981 Folate transport and metabolism 4
nta00260 Glycine, serine and threonine metabolism 4
nta00350 Tyrosine metabolism 4
nta00360 Phenylalanine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00960 Tropane, piperidine and pyridine alkaloid biosynthesis 4
sly00940 Phenylpropanoid biosynthesis 3
sly00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00100 Steroid biosynthesis 6
sly00909 Sesquiterpenoid and triterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04626 Plant-pathogen interaction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 4
sot00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00910 Nitrogen metabolism 2
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00670 One carbon pool by folate 2
gma01200 Carbon metabolism 2
gma04814 Motor proteins 2
gma00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
gma00905 Brassinosteroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 2
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04142 Lysosome 2
bra04144 Endocytosis 2
bra05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00941 Flavonoid biosynthesis 3
vvi00410 beta-Alanine metabolism 2
vvi04016 MAPK signaling pathway - plant 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
ppo03050 Proteasome 2
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00410 beta-Alanine metabolism 4
ppo00260 Glycine, serine and threonine metabolism 2
ppo00350 Tyrosine metabolism 2
ppo00360 Phenylalanine metabolism 2
ppo00950 Isoquinoline alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00410 beta-Alanine metabolism 4
ppo00260 Glycine, serine and threonine metabolism 2
ppo00350 Tyrosine metabolism 2
ppo00360 Phenylalanine metabolism 2
ppo00950 Isoquinoline alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00260 Glycine, serine and threonine metabolism 2
mtr00350 Tyrosine metabolism 2
mtr00360 Phenylalanine metabolism 2
mtr00410 beta-Alanine metabolism 2
mtr00950 Isoquinoline alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00260 Glycine, serine and threonine metabolism 2
mtr00350 Tyrosine metabolism 2
mtr00360 Phenylalanine metabolism 2
mtr00410 beta-Alanine metabolism 2
mtr00950 Isoquinoline alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00240 Pyrimidine metabolism 3
mtr01232 Nucleotide metabolism 3
mtr01240 Biosynthesis of cofactors 3
mtr00260 Glycine, serine and threonine metabolism 2
mtr00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00260 Glycine, serine and threonine metabolism 3
ghi00350 Tyrosine metabolism 3
ghi00360 Phenylalanine metabolism 3
ghi00410 beta-Alanine metabolism 3
ghi00950 Isoquinoline alkaloid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00260 Glycine, serine and threonine metabolism 2
ghi00350 Tyrosine metabolism 2
ghi00360 Phenylalanine metabolism 2
ghi00410 beta-Alanine metabolism 2
ghi00950 Isoquinoline alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00260 Glycine, serine and threonine metabolism 3
ghi00350 Tyrosine metabolism 3
ghi00360 Phenylalanine metabolism 3
ghi00410 beta-Alanine metabolism 3
ghi00950 Isoquinoline alkaloid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00260 Glycine, serine and threonine metabolism 4
bna00350 Tyrosine metabolism 4
bna00360 Phenylalanine metabolism 4
bna00410 beta-Alanine metabolism 4
bna00950 Isoquinoline alkaloid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00260 Glycine, serine and threonine metabolism 4
bna00350 Tyrosine metabolism 4
bna00360 Phenylalanine metabolism 4
bna00410 beta-Alanine metabolism 4
bna00950 Isoquinoline alkaloid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00260 Glycine, serine and threonine metabolism 4
bna00350 Tyrosine metabolism 4
bna00360 Phenylalanine metabolism 4
bna00410 beta-Alanine metabolism 4
bna00950 Isoquinoline alkaloid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00260 Glycine, serine and threonine metabolism 2
cit00350 Tyrosine metabolism 2
cit00360 Phenylalanine metabolism 2
cit00410 beta-Alanine metabolism 2
cit00950 Isoquinoline alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00260 Glycine, serine and threonine metabolism 2
cit00350 Tyrosine metabolism 2
cit00360 Phenylalanine metabolism 2
cit00410 beta-Alanine metabolism 2
cit00950 Isoquinoline alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 4
zma00280 Valine, leucine and isoleucine degradation 3
zma01210 2-Oxocarboxylic acid metabolism 3
zma04146 Peroxisome 2
zma00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00250 Alanine, aspartate and glutamate metabolism 6
tae00260 Glycine, serine and threonine metabolism 6
tae01200 Carbon metabolism 6
tae00280 Valine, leucine and isoleucine degradation 4
tae01210 2-Oxocarboxylic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00250 Alanine, aspartate and glutamate metabolism 6
tae00260 Glycine, serine and threonine metabolism 6
tae01200 Carbon metabolism 6
tae00280 Valine, leucine and isoleucine degradation 4
tae01210 2-Oxocarboxylic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00260 Glycine, serine and threonine metabolism 3
tae00350 Tyrosine metabolism 3
tae00360 Phenylalanine metabolism 3
tae00410 beta-Alanine metabolism 3
tae00950 Isoquinoline alkaloid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 3
hvu04016 MAPK signaling pathway - plant 2
hvu04070 Phosphatidylinositol signaling system 2
hvu04626 Plant-pathogen interaction 2
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00410 beta-Alanine metabolism 3
sbi00260 Glycine, serine and threonine metabolism 2
sbi00350 Tyrosine metabolism 2
sbi00360 Phenylalanine metabolism 2
sbi00950 Isoquinoline alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00410 beta-Alanine metabolism 3
sbi00260 Glycine, serine and threonine metabolism 2
sbi00350 Tyrosine metabolism 2
sbi00360 Phenylalanine metabolism 2
sbi00950 Isoquinoline alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00410 beta-Alanine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107778057 107795029 107807126 101253199 101254319 101266123 102580758 102584319 818849 100778802 100798722 100817454 103865952 103858017 100249520 100267280 7492380 7453796 7458050 11416558 25501447 11413114 107946240 107949638 107928693 106428169 106391724 106388276 102610710 102618241 4336153 100383438 123189518 123053625 123130639 123426997 8073581 8063333 100837848 5725910 5723185
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