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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1  107773429  F-box/kelch-repeat protein At3g06240 
 sly-u.5  101260412  F-box/kelch-repeat protein At3g06240 
 sot-r.1  107062273  F-box/kelch-repeat protein At3g06240-like 
 sot-r.1  102605926  F-box/kelch-repeat protein At3g23880 
 ath-u.5  AT3G06240  F-box family protein 
 ath-u.5  AT3G07870  F-box and associated interaction domains-containing protein 
 ath-u.5  AT3G23880  F-box and associated interaction domains-containing protein 
 gma-u.5  102666785  F-box/kelch-repeat protein At3g17530 
 bra-r.6  103828697  F-box/kelch-repeat protein At3g23880 
 ppo-u.5  7455978  F-box protein At3g07870 
 ppo-u.5  7455824  F-box protein CPR1 
 mtr-u.5  120580159  F-box/kelch-repeat protein At3g06240 
 mtr-u.5  120580220  F-box/kelch-repeat protein At3g06240 
 ghi-r.1  107895289  F-box protein At3g07870 
 ghi-r.1  107910977  F-box protein At3g07870 
 bna-r.1  125594169  F-box protein At4g22390-like 
 bna-r.1  111206595  F-box protein CPR1-like 
 bdi-r.1  100823474  F-box/LRR-repeat protein At2g43260 

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Top 50 coexpressed genes to 107773429 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107773429 (nta-r.1 coexpression data)

CoexMap"107764839"


ntaLOC107764839 | Entrez gene ID : 107764839
Species nta sly sot ath gma bra ppo mtr ghi bna bdi zma cre sbi cit tae osa hvu vvi
Paralog 1 1 2 3 1 1 2 2 2 2 1 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_075105018.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 4,  extr 1  (predict for XP_075105018.1)
Subcellular
localization
TargetP
other 8  (predict for XP_075105018.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

nta-r.1
for
107773429


sly-u.5
for
101260412


sot-r.1
for
107062273


sot-r.1
for
102605926


ath-u.5
for
AT3G06240


ath-u.5
for
AT3G07870


ath-u.5
for
AT3G23880


gma-u.5
for
102666785


bra-r.6
for
103828697


ppo-u.5
for
7455978


ppo-u.5
for
7455824


mtr-u.5
for
120580159


mtr-u.5
for
120580220


ghi-r.1
for
107895289


ghi-r.1
for
107910977


bna-r.1
for
125594169


bna-r.1
for
111206595


bdi-r.1
for
100823474



Ortholog ID: 25
Species nta nta nta sly sot ath ath gma gma gma bra vvi mtr mtr ghi ghi bna bdi
Symbol LOC107824897 LOC107792385 LOC107793667 LOC101244418 LOC107062273 AT3G06240 AT3G07870 LOC100789763 LOC100809732 LOC100789250 LOC103859247 LOC100253229 LOC11407622 LOC25483269 LOC107888906 LOC107920139 LOC106388992 LOC100823474
Function* F-box/kelch-repeat protein At3g23880 F-box/kelch-repeat protein At3g23880-like F-box/kelch-repeat protein At3g23880-like F-box/kelch-repeat protein At3g23880-like F-box/kelch-repeat protein At3g06240-like F-box family protein F-box and associated interaction domains-containing protein F-box protein CPR1 F-box/kelch-repeat protein At3g06240 putative F-box protein F-box protein At3g07870 F-box protein CPR1 F-box/kelch-repeat protein At3g23880 F-box/kelch-repeat protein At3g23880 F-box/kelch-repeat protein At3g06240 F-box/kelch-repeat protein At3g23880 F-box protein At3g07870-like F-box/LRR-repeat protein At2g43260
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 4
nta03430 Mismatch repair 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
ghi04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04142 Lysosome 4
bna00480 Glutathione metabolism 2
bna00600 Sphingolipid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107824897 107792385 107793667 101244418 107062273 819798 819978 100789763 100809732 100789250 103859247 100253229 11407622 25483269 107888906 107920139 106388992 100823474
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