Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107767548   putative polygalacturonase At3g15720 
 nta-r.1   107770857   putative polygalacturonase At3g15720 
 nta-r.1   107761023   putative polygalacturonase At3g15720 
 sly-u.5   101256371   probable polygalacturonase At3g15720 
 sly-u.5   PGcat   polygalacturonase 
 sot-r.1   102602941   probable polygalacturonase At3g15720 
 gma-u.5   100787465   probable polygalacturonase At1g80170 
 mtr-u.5   25495857   probable polygalacturonase At3g15720 

close


Top 50 coexpressed genes to 107767548 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 107767548 (nta-r.1 coexpression data)

CoexMap"107767548"


ntaLOC107767548 | Entrez gene ID : 107767548      
Species nta sly sot gma mtr bra zma cre ghi sbi cit ppo ath tae bna osa hvu vvi bdi
Paralog 3 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG nta00040 [list] [network] Pentose and glucuronate interconversions (239 genes)
GO BP
GO:0005975 [list] [network] carbohydrate metabolic process  (1425 genes)  IEA  
GO CC
GO MF
GO:0004650 [list] [network] polygalacturonase activity  (108 genes)  IEA  
Protein XP_016442066.1 [sequence] [blastp]
XP_016442067.1 [sequence] [blastp]
XP_016442068.1 [sequence] [blastp]
XP_016442069.1 [sequence] [blastp]
XP_016442070.1 [sequence] [blastp]
XP_016442072.1 [sequence] [blastp]
XP_075102738.1 [sequence] [blastp]
XP_075102739.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 3,  cyto 2,  extr 2,  chlo 1,  cysk_nucl 1,  cyto_plas 1  (predict for XP_016442066.1)
extr 3,  chlo 2,  nucl 2,  cyto 1,  plas 1,  cyto_plas 1  (predict for XP_016442067.1)
nucl 3,  cyto 2,  extr 2,  chlo 1,  cysk_nucl 1,  cyto_plas 1  (predict for XP_016442068.1)
nucl 6,  cyto 3  (predict for XP_016442069.1)
pero 4,  chlo 2,  mito 2,  chlo_mito 2,  cyto_pero 2  (predict for XP_016442070.1)
chlo 4,  pero 3,  mito 1,  extr 1,  cyto_pero 1  (predict for XP_016442072.1)
nucl 3,  cyto 2,  extr 2,  chlo 1,  cysk_nucl 1,  cyto_plas 1  (predict for XP_075102738.1)
nucl 3,  extr 3,  chlo 1,  cyto 1,  cysk_nucl 1  (predict for XP_075102739.1)
Subcellular
localization
TargetP
scret 8  (predict for XP_016442066.1)
scret 9  (predict for XP_016442067.1)
scret 8  (predict for XP_016442068.1)
chlo 4,  other 3  (predict for XP_016442069.1)
mito 9,  chlo 3  (predict for XP_016442070.1)
chlo 7  (predict for XP_016442072.1)
scret 8  (predict for XP_075102738.1)
scret 9  (predict for XP_075102739.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107767548
nta-r.1
for
107770857
nta-r.1
for
107761023
sly-u.5
for
101256371
sly-u.5
for
PGcat
sot-r.1
for
102602941
gma-u.5
for
100787465
mtr-u.5
for
25495857


Ortholog ID: 2099
Species nta nta nta sly sly sot gma mtr tae
Symbol LOC107770857 LOC107761023 LOC107776714 LOC101256371 PGcat LOC102602941 LOC100787465 LOC25495857 LOC123049740
Function* putative polygalacturonase At3g15720 putative polygalacturonase At3g15720 putative polygalacturonase At3g15720 probable polygalacturonase At3g15720 polygalacturonase probable polygalacturonase At3g15720 probable polygalacturonase At1g80170 probable polygalacturonase At3g15720 polygalacturonase ADPG1-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 3
nta04075 Plant hormone signal transduction 3
nta02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00920 Sulfur metabolism 3
sly01320 Sulfur cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00511 Other glycan degradation 2
sly04142 Lysosome 2
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01212 Fatty acid metabolism 3
sot00061 Fatty acid biosynthesis 2
sot00780 Biotin metabolism 2
sot01240 Biosynthesis of cofactors 2
sot00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00040 Pentose and glucuronate interconversions 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107770857 107761023 107776714 101256371 543587 102602941 100787465 25495857 123049740
The preparation time of this page was 0.1 [sec].