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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107767594   pentatricopeptide repeat-containing protein At4g14850-like 
 sly-u.5   101247907   pentatricopeptide repeat-containing protein At4g14850-like 
 gma-u.5   100788530   pentatricopeptide repeat-containing protein At5g04780, mitochondrial 
 vvi-u.5   100248771   pentatricopeptide repeat-containing protein At5g04780, mitochondrial 
 ppo-u.5   7456778   pentatricopeptide repeat-containing protein At5g04780, mitochondrial 
 mtr-u.5   25485507   pentatricopeptide repeat-containing protein At5g04780, mitochondrial 
 osa-u.5   4346517   pentatricopeptide repeat-containing protein At4g14850 
 osa-u.5   9268802   pentatricopeptide repeat-containing protein At4g14850 
 zma-u.5   103653700   pentatricopeptide repeat-containing protein At4g14850 

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Top 50 coexpressed genes to 107767594 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107767594 (nta-r.1 coexpression data)

CoexMap"107767594"


ntaLOC107767594 | Entrez gene ID : 107767594      
Species nta sly gma vvi ppo mtr osa zma hvu bna cit bra ghi sbi bdi ath tae cre sot
Paralog 1 1 1 1 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (732 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (2210 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (2607 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_016442131.2 [sequence] [blastp]
XP_016442133.2 [sequence] [blastp]
XP_016442134.2 [sequence] [blastp]
XP_016442135.2 [sequence] [blastp]
XP_075084390.1 [sequence] [blastp]
XP_075084391.1 [sequence] [blastp]
XP_075084392.1 [sequence] [blastp]
XP_075084393.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  nucl 1,  mito 1  (predict for XP_016442131.2)
chlo 7,  nucl 1,  mito 1  (predict for XP_016442133.2)
chlo 7,  nucl 1,  mito 1  (predict for XP_016442134.2)
chlo 7,  nucl 1,  mito 1  (predict for XP_016442135.2)
chlo 7,  nucl 1,  mito 1  (predict for XP_075084390.1)
chlo 7,  nucl 1,  mito 1  (predict for XP_075084391.1)
chlo 7,  nucl 1,  mito 1  (predict for XP_075084392.1)
chlo 7,  nucl 1,  mito 1  (predict for XP_075084393.1)
Subcellular
localization
TargetP
mito 7  (predict for XP_016442131.2)
mito 7  (predict for XP_016442133.2)
mito 7  (predict for XP_016442134.2)
mito 7  (predict for XP_016442135.2)
mito 7  (predict for XP_075084390.1)
mito 7  (predict for XP_075084391.1)
mito 7  (predict for XP_075084392.1)
mito 7  (predict for XP_075084393.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107767594
sly-u.5
for
101247907
gma-u.5
for
100788530
vvi-u.5
for
100248771
ppo-u.5
for
7456778
mtr-u.5
for
25485507
osa-u.5
for
4346517
osa-u.5
for
9268802
zma-u.5
for
103653700


Ortholog ID: 12081
Species nta nta sly sot gma vvi ppo mtr ghi ghi cit osa osa zma tae tae hvu sbi bdi
Symbol LOC107813408 LOC107767594 LOC101247907 LOC102604547 LOC100788530 LOC100248771 LOC7456778 LOC25485507 LOC107927449 LOC107903203 LOC102613800 LOC9268802 LOC4346517 LOC103653700 LOC123127574 LOC123137303 LOC123401534 LOC8070586 LOC100825636
Function* pentatricopeptide repeat-containing protein At4g14850-like pentatricopeptide repeat-containing protein At4g14850-like pentatricopeptide repeat-containing protein At4g14850-like putative pentatricopeptide repeat-containing protein At5g52630 pentatricopeptide repeat-containing protein At5g04780, mitochondrial pentatricopeptide repeat-containing protein At5g04780, mitochondrial pentatricopeptide repeat-containing protein At5g04780, mitochondrial pentatricopeptide repeat-containing protein At5g04780, mitochondrial pentatricopeptide repeat-containing protein At5g04780, mitochondrial pentatricopeptide repeat-containing protein At5g04780, mitochondrial pentatricopeptide repeat-containing protein At5g04780, mitochondrial-like pentatricopeptide repeat-containing protein At4g14850 pentatricopeptide repeat-containing protein At4g14850 pentatricopeptide repeat-containing protein At4g14850 pentatricopeptide repeat-containing protein At4g14850 pentatricopeptide repeat-containing protein At4g14850 pentatricopeptide repeat-containing protein At4g14850-like pentatricopeptide repeat-containing protein At4g14850 pentatricopeptide repeat-containing protein At4g14850
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 4
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 4
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 3
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 2
ghi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 3
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00300 Lysine biosynthesis 6
tae01230 Biosynthesis of amino acids 6
tae00470 D-Amino acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 7
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107813408 107767594 101247907 102604547 100788530 100248771 7456778 25485507 107927449 107903203 102613800 9268802 4346517 103653700 123127574 123137303 123401534 8070586 100825636
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