ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
nta-r.1	107769711	uncharacterized LOC107769711
nta-r.1	107806140	WD repeat-containing protein YMR102C-like
nta-r.1	107784931	uncharacterized LOC107784931
nta-r.1	107787387	uncharacterized LOC107787387
sly-u.5	101265109	uncharacterized LOC101265109
sly-u.5	101262736	uncharacterized WD repeat-containing protein C3H5.08c
sly-u.5	101244103	uncharacterized LOC101244103
sot-r.1	102579447	POC1 centriolar protein homolog A-like
sot-r.1	102583402	WD repeat-containing protein 44
ath-u.5	AT2G37670	Transducin/WD40 repeat-like superfamily protein
ath-u.5	AT1G64610	Transducin/WD40 repeat-like superfamily protein
ath-u.5	AT1G48870	Transducin/WD40 repeat-like superfamily protein
gma-u.5	100806747	WD repeat-containing protein 44
gma-u.5	100807177	WD repeat-containing protein 44
gma-u.5	100815065	WD repeat-containing protein 44
bra-r.6	103844882	WD repeat-containing protein 44
bra-r.6	103857052	WD repeat-containing protein 44
bra-r.6	103852028	WD repeat-containing protein 44
vvi-u.5	100247276	WD repeat-containing protein YMR102C
vvi-u.5	100245187	WD repeat-containing protein YMR102C
vvi-u.5	100241604	WD repeat-containing protein YMR102C
ppo-u.5	7462346	uncharacterized LOC7462346
ppo-u.5	7497506	uncharacterized LOC7497506
ppo-u.5	7497266	uncharacterized LOC7497266
mtr-u.5	11435030	2-deoxy-glucose resistant protein 2
mtr-u.5	25502243	uncharacterized WD repeat-containing protein alr3466
mtr-u.5	11436750	WD repeat-containing protein 44
ghi-r.1	107895279	WD repeat-containing protein 44
ghi-r.1	107924375	WD repeat-containing protein 44
bna-r.1	125576587	uncharacterized LOC125576587
bna-r.1	111200919	WD repeat-containing protein 44-like
cit-r.1	102618704	WD repeat-containing protein YMR102C-like
cit-r.1	102614368	uncharacterized LOC102614368
cit-r.1	102612372	uncharacterized LOC102612372
osa-u.5	4336699	uncharacterized LOC4336699
osa-u.5	4335815	uncharacterized LOC4335815
osa-u.5	4331395	uncharacterized LOC4331395
zma-u.5	100501308	WD repeat-containing protein 44
zma-u.5	103653831	WD repeat-containing protein 44
tae-r.2	123055214	WD repeat-containing protein 44
tae-r.2	123189822	WD repeat-containing protein 44
hvu-r.1	123427315	WD repeat-containing protein 44-like
hvu-r.1	123449932	uncharacterized LOC123449932
sbi-r.1	8078001	WD repeat-containing protein 44
sbi-r.1	8076465	WD repeat-containing protein 44
bdi-r.1	100845914	WD repeat-containing protein 44
bdi-r.1	100844520	WD repeat-containing protein 44
bdi-r.1	100842788	uncharacterized LOC100842788
cre-r.1	CHLRE_06g276100v5	uncharacterized protein

Top 50 coexpressed genes to 107769711 (nta-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107769711 (nta-r.1 coexpression data)

CoexMap"107769711"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0005515 [list] [network] protein binding

(7685 genes)

IEA

Protein

XP_016444433.2 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9

(predict for XP_016444433.2)

Subcellular
localization
TargetP

other 9

(predict for XP_016444433.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	nta-r.1 for 107769711	nta-r.1 for 107806140	nta-r.1 for 107784931	nta-r.1 for 107787387	sly-u.5 for 101265109	sly-u.5 for 101262736	sly-u.5 for 101244103	sot-r.1 for 102579447	sot-r.1 for 102583402	ath-u.5 for AT2G37670	ath-u.5 for AT1G64610	ath-u.5 for AT1G48870	gma-u.5 for 100806747	gma-u.5 for 100807177	gma-u.5 for 100815065	bra-r.6 for 103844882	bra-r.6 for 103857052	bra-r.6 for 103852028	vvi-u.5 for 100247276	vvi-u.5 for 100245187	vvi-u.5 for 100241604	ppo-u.5 for 7462346	ppo-u.5 for 7497506	ppo-u.5 for 7497266	mtr-u.5 for 11435030	mtr-u.5 for 25502243	mtr-u.5 for 11436750	ghi-r.1 for 107895279	ghi-r.1 for 107924375	bna-r.1 for 125576587	bna-r.1 for 111200919	cit-r.1 for 102618704	cit-r.1 for 102614368	cit-r.1 for 102612372	osa-u.5 for 4336699	osa-u.5 for 4335815	osa-u.5 for 4331395	zma-u.5 for 100501308	zma-u.5 for 103653831	tae-r.2 for 123055214	tae-r.2 for 123189822	hvu-r.1 for 123427315	hvu-r.1 for 123449932	sbi-r.1 for 8078001	sbi-r.1 for 8076465	bdi-r.1 for 100845914	bdi-r.1 for 100844520	bdi-r.1 for 100842788	cre-r.1 for CHLRE_06g276100v5

Ortholog

Ortholog ID: 182

Species

nta

sly

sot

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC107823380

WD repeat-containing protein YMR102C

uncharacterized LOC107766553

uncharacterized LOC101245001

uncharacterized LOC101249662

uncharacterized LOC101256031

WD repeat-containing protein 44

U4/U6 small nuclear ribonucleoprotein Prp4

WD repeat-containing protein 44

Transducin/WD40 repeat-like superfamily protein

WD repeat-containing protein 44

WD repeat-containing protein YMR102C

WD repeat-containing protein 44

uncharacterized LOC103850247

WD repeat-containing protein YMR102C

uncharacterized LOC100249640

uncharacterized LOC7497506

uncharacterized LOC7497266

vegetative incompatibility protein HET-E-1

2-deoxy-glucose resistant protein 2

uncharacterized WD repeat-containing protein alr3466

WD repeat-containing protein 44

WD repeat-containing protein YMR102C-like

uncharacterized LOC102614368

uncharacterized LOC102609724

uncharacterized LOC4336699

uncharacterized LOC4337413

WD repeat-containing protein 44

Transducin/WD40 repeat-like superfamily protein

WD repeat-containing protein YMR102C

WD repeat-containing protein 44

uncharacterized LOC123449932

uncharacterized WD repeat-containing protein sll0163-like

WD repeat-containing protein 44-like

WD repeat-containing protein 44

2-deoxy-glucose resistant protein 2

uncharacterized LOC100842788

WD repeat-containing protein 44

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00920	Sulfur metabolism	2
nta00790	Folate biosynthesis	2
nta01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03015	mRNA surveillance pathway	4
nta03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00940	Phenylpropanoid biosynthesis	4
sly00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04626	Plant-pathogen interaction	4
bra04016	MAPK signaling pathway - plant	4
bra02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03015	mRNA surveillance pathway	3
vvi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	2
ghi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04075	Plant hormone signal transduction	5
bna04626	Plant-pathogen interaction	5
bna00860	Porphyrin metabolism	2
bna01240	Biosynthesis of cofactors	2
bna04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04130	SNARE interactions in vesicular transport	2
cit04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00561	Glycerolipid metabolism	3
osa00566	Sulfoquinovose metabolism	3
osa00564	Glycerophospholipid metabolism	2
osa00565	Ether lipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00061	Fatty acid biosynthesis	4
zma01212	Fatty acid metabolism	4
zma00900	Terpenoid backbone biosynthesis	3
zma00620	Pyruvate metabolism	2
zma00640	Propanoate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00062	Fatty acid elongation	6
tae04626	Plant-pathogen interaction	6
tae00900	Terpenoid backbone biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00500	Starch and sucrose metabolism	3
tae03015	mRNA surveillance pathway	2
tae04382	Cornified envelope formation	2
tae04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04712	Circadian rhythm - plant	4
hvu04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00190	Oxidative phosphorylation	4
sbi04145	Phagosome	2
sbi03250	Viral life cycle - HIV-1	2
sbi03272	Virion - Hepatitis viruses	2
sbi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00280	Valine, leucine and isoleucine degradation	2

Expression

Expression pattern

Entrez Gene ID^*

107823380

107770909

107766553

101245001

101249662

101256031

102583402

102585613

102595963

842769

831780

820786

100807177

100817209

100801576

103844882

103865619

103850247

100245187

100241604

100249640

7497506

7497266

7467055

11435030

25502243

25487371

107920400

107904514

121215517

106387484

106366726

102618704

102614368

102609724

4336699

4337413

103641868

103641627

123190040

123191051

123127830

123449932

123426697

123399755

8057600

8073010

100842788

100828955

100825146

5721740

The preparation time of this page was 0.3 [sec].


Species	nta	sly	sot	ath	gma	bra	vvi	ppo	mtr	ghi	bna	cit	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	3	2	3	3	3	3	3	3	2	2	3	3	2	2	2	2	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107769711 (nta-r.1 coexpression data)

Top 50 enrichment test to 107769711 (nta-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**