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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107770023   pentatricopeptide repeat-containing protein At4g20740 
 sly-u.5   101245985   pentatricopeptide repeat-containing protein 
 ath-u.5   EMB3131   Pentatricopeptide repeat (PPR-like) superfamily protein 
 gma-u.5   121174284   pentatricopeptide repeat-containing protein At4g20740-like 
 gma-u.5   102662754   pentatricopeptide repeat-containing protein At4g20740 
 gma-u.5   100788816   pentatricopeptide repeat-containing protein At4g20740 
 vvi-u.5   100251773   pentatricopeptide repeat-containing protein At4g20740 
 ppo-u.5   7460213   pentatricopeptide repeat-containing protein At4g20740 
 mtr-u.5   11444480   pentatricopeptide repeat-containing protein At4g20740 
 osa-u.5   4342554   pentatricopeptide repeat-containing protein At4g20740 
 zma-u.5   103632011   pentatricopeptide repeat-containing protein At4g20740 

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Top 50 coexpressed genes to 107770023 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107770023 (nta-r.1 coexpression data)

CoexMap"107770023"


ntaLOC107770023 | Entrez gene ID : 107770023      
Species nta sly ath gma vvi ppo mtr osa zma bdi hvu bra cit bna sbi ghi sot cre tae
Paralog 1 1 1 3 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003729 [list] [network] mRNA binding  (573 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_016444769.2 [sequence] [blastp]
XP_016444775.2 [sequence] [blastp]
XP_075094049.1 [sequence] [blastp]
XP_075094050.1 [sequence] [blastp]
XP_075094051.1 [sequence] [blastp]
XP_075094052.1 [sequence] [blastp]
XP_075094054.1 [sequence] [blastp]
XP_075094055.1 [sequence] [blastp]
XP_075094056.1 [sequence] [blastp]
XP_075094057.1 [sequence] [blastp]
XP_075094058.1 [sequence] [blastp]
XP_075094059.1 [sequence] [blastp]
XP_075094060.1 [sequence] [blastp]
XP_075094061.1 [sequence] [blastp]
XP_075094062.1 [sequence] [blastp]
XP_075094063.1 [sequence] [blastp]
XP_075094064.1 [sequence] [blastp]
XP_075094065.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 2,  mito 2  (predict for XP_016444769.2)
chlo 6,  nucl 2,  mito 2  (predict for XP_016444775.2)
chlo 6,  nucl 2,  mito 2  (predict for XP_075094049.1)
chlo 6,  nucl 2,  mito 2  (predict for XP_075094050.1)
chlo 6,  nucl 2,  mito 2  (predict for XP_075094051.1)
chlo 6,  nucl 2,  mito 2  (predict for XP_075094052.1)
chlo 6,  nucl 2,  mito 2  (predict for XP_075094054.1)
chlo 6,  nucl 2,  mito 2  (predict for XP_075094055.1)
chlo 6,  nucl 2,  mito 2  (predict for XP_075094056.1)
chlo 6,  nucl 2,  mito 2  (predict for XP_075094057.1)
chlo 6,  nucl 2,  mito 2  (predict for XP_075094058.1)
chlo 6,  nucl 2,  mito 2  (predict for XP_075094059.1)
chlo 6,  nucl 2,  mito 2  (predict for XP_075094060.1)
chlo 6,  nucl 2,  mito 2  (predict for XP_075094061.1)
chlo 6,  nucl 2,  mito 2  (predict for XP_075094062.1)
chlo 6,  nucl 2,  mito 2  (predict for XP_075094063.1)
chlo 6,  nucl 2,  mito 2  (predict for XP_075094064.1)
chlo 6,  nucl 2,  mito 2  (predict for XP_075094065.1)
Subcellular
localization
TargetP
mito 5  (predict for XP_016444769.2)
mito 5  (predict for XP_016444775.2)
mito 5  (predict for XP_075094049.1)
mito 5  (predict for XP_075094050.1)
mito 5  (predict for XP_075094051.1)
mito 5  (predict for XP_075094052.1)
mito 5  (predict for XP_075094054.1)
mito 5  (predict for XP_075094055.1)
mito 5  (predict for XP_075094056.1)
mito 5  (predict for XP_075094057.1)
mito 5  (predict for XP_075094058.1)
mito 5  (predict for XP_075094059.1)
mito 5  (predict for XP_075094060.1)
mito 5  (predict for XP_075094061.1)
mito 5  (predict for XP_075094062.1)
mito 5  (predict for XP_075094063.1)
mito 5  (predict for XP_075094064.1)
mito 5  (predict for XP_075094065.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107770023
sly-u.5
for
101245985
ath-u.5
for
EMB3131
gma-u.5
for
121174284
gma-u.5
for
102662754
gma-u.5
for
100788816
vvi-u.5
for
100251773
ppo-u.5
for
7460213
mtr-u.5
for
11444480
osa-u.5
for
4342554
zma-u.5
for
103632011


Ortholog ID: 9029
Species nta nta sly sot ath gma gma bra vvi ppo mtr ghi ghi bna bna cit osa zma tae hvu sbi bdi
Symbol LOC107770023 LOC107800251 LOC101245985 LOC102591649 EMB3131 LOC121174284 LOC100788816 LOC103858343 LOC100251773 LOC7460213 LOC11444480 LOC107900572 LOC107962094 LOC111211642 LOC106425591 LOC102617298 LOC4342554 LOC103632011 LOC123104119 LOC123430040 LOC8060734 LOC100833963
Function* pentatricopeptide repeat-containing protein At4g20740 pentatricopeptide repeat-containing protein At4g20740-like pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At4g20740 Pentatricopeptide repeat (PPR-like) superfamily protein pentatricopeptide repeat-containing protein At4g20740-like pentatricopeptide repeat-containing protein At4g20740 pentatricopeptide repeat-containing protein At4g20740 pentatricopeptide repeat-containing protein At4g20740 pentatricopeptide repeat-containing protein At4g20740 pentatricopeptide repeat-containing protein At4g20740 pentatricopeptide repeat-containing protein At4g20740 pentatricopeptide repeat-containing protein At4g20740 pentatricopeptide repeat-containing protein At4g20740 pentatricopeptide repeat-containing protein At4g20740 pentatricopeptide repeat-containing protein At4g20740 pentatricopeptide repeat-containing protein At4g20740 pentatricopeptide repeat-containing protein At4g20740 pentatricopeptide repeat-containing protein At4g20740 pentatricopeptide repeat-containing protein At4g20740 pentatricopeptide repeat-containing protein At4g20740 pentatricopeptide repeat-containing protein At4g20740
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 4
vvi03013 Nucleocytoplasmic transport 2
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00270 Cysteine and methionine metabolism 2
ghi04148 Efferocytosis 2
ghi04141 Protein processing in endoplasmic reticulum 2
ghi03040 Spliceosome 2
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi00270 Cysteine and methionine metabolism 2
ghi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00230 Purine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 2
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107770023 107800251 101245985 102591649 827823 121174284 100788816 103858343 100251773 7460213 11444480 107900572 107962094 111211642 106425591 102617298 4342554 103632011 123104119 123430040 8060734 100833963
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