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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   SHINE3   ethylene-responsive transcription factor SHINE3 
 sly-u.5   101258133   ethylene-responsive transcription factor WIN1-like 
 sly-u.5   ERF-H3   ethylene-responsive transcription factor WIN1/SHN1 
 gma-u.5   100806821   ethylene-responsive transcription factor SHINE 2 
 vvi-u.5   100259484   ethylene-responsive transcription factor SHINE 2 
 vvi-u.5   100250826   ethylene-responsive transcription factor WIN1 
 ppo-u.5   7459028   ethylene-responsive transcription factor SHINE 2 
 ppo-u.5   7468634   ethylene-responsive transcription factor SHINE 2 
 osa-u.5   4341466   ethylene-responsive transcription factor WIN1 
 zma-u.5   103638685   ethylene-responsive transcription factor WIN1 

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Top 50 coexpressed genes to SHINE3 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to SHINE3 (sly-u.5 coexpression data)

CoexMap"107770256"


ntaLOC107770256 | Entrez gene ID : 107770256      
Species sly gma vvi ppo osa zma bdi mtr bra hvu cit bna ath sbi ghi sot nta cre tae
Paralog 3 1 2 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (2987 genes)  IEA  
GO CC
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (2091 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (3714 genes)  IEA  
Protein XP_016445030.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  chlo 2  (predict for XP_016445030.1)
Subcellular
localization
TargetP
mito 8,  other 5  (predict for XP_016445030.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
SHINE3
sly-u.5
for
101258133
sly-u.5
for
ERF-H3
gma-u.5
for
100806821
vvi-u.5
for
100259484
vvi-u.5
for
100250826
ppo-u.5
for
7459028
ppo-u.5
for
7468634
osa-u.5
for
4341466
zma-u.5
for
103638685


Ortholog ID: 1186
Species nta nta sly sly gma gma vvi vvi ppo ppo ghi ghi cit cit osa zma tae tae bdi bdi
Symbol LOC107805739 LOC107829873 SHINE3 ERF-H3 LOC100794649 LOC100796962 LOC100259484 LOC100250826 LOC7470102 LOC7485479 LOC107962894 LOC107896090 LOC102626923 LOC102620575 LOC4341466 LOC103638685 LOC123141402 LOC123157531 LOC100840291 LOC100837885
Function* ethylene-responsive transcription factor WIN1 ethylene-responsive transcription factor WIN1-like ethylene-responsive transcription factor SHINE3 ethylene-responsive transcription factor WIN1/SHN1 ethylene-responsive transcription factor SHINE 2 ethylene-responsive transcription factor WIN1 ethylene-responsive transcription factor SHINE 2 ethylene-responsive transcription factor WIN1 ethylene-responsive transcription factor WIN1 ethylene-responsive transcription factor WIN1 ethylene-responsive transcription factor SHINE 2 ethylene-responsive transcription factor WIN1 ethylene-responsive transcription factor WIN1 ethylene-responsive transcription factor SHINE 2 ethylene-responsive transcription factor WIN1 ethylene-responsive transcription factor WIN1 ethylene-responsive transcription factor WIN1 ethylene-responsive transcription factor WIN1 ethylene-responsive transcription factor WIN1 ethylene-responsive transcription factor WIN1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00561 Glycerolipid metabolism 2
nta00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 3
sly00073 Cutin, suberine and wax biosynthesis 2
sly04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00561 Glycerolipid metabolism 4
gma00564 Glycerophospholipid metabolism 4
gma02010 ABC transporters 2
gma00061 Fatty acid biosynthesis 2
gma01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00380 Tryptophan metabolism 4
cit00940 Phenylpropanoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00073 Cutin, suberine and wax biosynthesis 2
cit00062 Fatty acid elongation 2
cit04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00073 Cutin, suberine and wax biosynthesis 3
osa04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00073 Cutin, suberine and wax biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107805739 107829873 101265036 101254289 100794649 100796962 100259484 100250826 7470102 7485479 107962894 107896090 102626923 102620575 4341466 103638685 123141402 123157531 100840291 100837885
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