ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
nta-r.1	107770697	uncharacterized LOC107770697
nta-r.1	107832089	uncharacterized LOC107832089
nta-r.1	107779017	uncharacterized LOC107779017
nta-r.1	107814531	uncharacterized LOC107814531
sly-u.5	104646853	uncharacterized LOC104646853
sly-u.5	104648036	uncharacterized LOC104648036
sot-r.1	102587306	uncharacterized LOC102587306
sot-r.1	102592047	uncharacterized LOC102592047
sot-r.1	102594108	uncharacterized LOC102594108
ath-u.5	AT3G27880	hypothetical protein (DUF1645)
ath-u.5	AT5G62770	membrane-associated kinase regulator, putative (DUF1645)
ath-u.5	AT1G23710	hypothetical protein (DUF1645)
gma-u.5	100806294	uncharacterized LOC100806294
gma-u.5	100805151	protein bfr2
bra-r.6	103840744	uncharacterized LOC103840744
bra-r.6	103875183	uncharacterized LOC103875183
bra-r.6	103874720	uncharacterized LOC103874720
vvi-u.5	100243388	uncharacterized LOC100243388
vvi-u.5	100254241	uncharacterized LOC100254241
vvi-u.5	100852726	uncharacterized LOC100852726
mtr-u.5	11406346	uncharacterized LOC11406346
mtr-u.5	11435651	uncharacterized LOC11435651
mtr-u.5	25493766	uncharacterized LOC25493766
ghi-r.1	107887693	histone H3.v1
ghi-r.1	107898668	uncharacterized LOC107898668
ghi-r.1	107926473	uncharacterized LOC107926473
bna-r.1	111208264	uncharacterized LOC111208264
bna-r.1	106424653	uncharacterized LOC106424653
bna-r.1	106394669	uncharacterized LOC106394669
cit-r.1	102616997	uncharacterized LOC102616997
cit-r.1	102615666	uncharacterized LOC102615666
cit-r.1	102619209	uncharacterized LOC102619209
osa-u.5	4339649	uncharacterized LOC4339649
osa-u.5	4326582	uncharacterized LOC4326582
osa-u.5	4327853	uncharacterized LOC4327853
zma-u.5	100277384	DUF1645 family protein
zma-u.5	100277000	uncharacterized LOC100277000
zma-u.5	100275692	uncharacterized LOC100275692
tae-r.2	123065501	uncharacterized LOC123065501
tae-r.2	123074567	uncharacterized LOC123074567
tae-r.2	123065466	uncharacterized LOC123065466
hvu-r.1	123440064	uncharacterized LOC123440064
hvu-r.1	123440016	uncharacterized LOC123440016
hvu-r.1	123420586	uncharacterized LOC123420586
sbi-r.1	8064690	uncharacterized LOC8064690
sbi-r.1	8064719	uncharacterized LOC8064719
sbi-r.1	8061813	uncharacterized LOC8061813
bdi-r.1	100825091	uncharacterized LOC100825091
bdi-r.1	100822333	uncharacterized LOC100822333
bdi-r.1	100822431	uncharacterized LOC100822431

Top 50 coexpressed genes to 107770697 (nta-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107770697 (nta-r.1 coexpression data)

CoexMap"107770697"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_016445520.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9, cyto_nucl 5

(predict for XP_016445520.1)

Subcellular
localization
TargetP

other 7

(predict for XP_016445520.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	nta-r.1 for 107770697	nta-r.1 for 107832089	nta-r.1 for 107779017	nta-r.1 for 107814531	sly-u.5 for 104646853	sly-u.5 for 104648036	sot-r.1 for 102587306	sot-r.1 for 102592047	sot-r.1 for 102594108	ath-u.5 for AT3G27880	ath-u.5 for AT5G62770	ath-u.5 for AT1G23710	gma-u.5 for 100806294	gma-u.5 for 100805151	bra-r.6 for 103840744	bra-r.6 for 103875183	bra-r.6 for 103874720	vvi-u.5 for 100243388	vvi-u.5 for 100254241	vvi-u.5 for 100852726	mtr-u.5 for 11406346	mtr-u.5 for 11435651	mtr-u.5 for 25493766	ghi-r.1 for 107887693	ghi-r.1 for 107898668	ghi-r.1 for 107926473	bna-r.1 for 111208264	bna-r.1 for 106424653	bna-r.1 for 106394669	cit-r.1 for 102616997	cit-r.1 for 102615666	cit-r.1 for 102619209	osa-u.5 for 4339649	osa-u.5 for 4326582	osa-u.5 for 4327853	zma-u.5 for 100277384	zma-u.5 for 100277000	zma-u.5 for 100275692	tae-r.2 for 123065501	tae-r.2 for 123074567	tae-r.2 for 123065466	hvu-r.1 for 123440064	hvu-r.1 for 123440016	hvu-r.1 for 123420586	sbi-r.1 for 8064690	sbi-r.1 for 8064719	sbi-r.1 for 8061813	bdi-r.1 for 100825091	bdi-r.1 for 100822333	bdi-r.1 for 100822431

Ortholog

Ortholog ID: 538

Species

nta

sly

sot

ath

gma

bra

vvi

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC107832089

uncharacterized LOC107819520

uncharacterized LOC107829043

uncharacterized LOC104648036

uncharacterized LOC101250946

uncharacterized LOC102592047

uncharacterized LOC102594108

uncharacterized LOC107062317

membrane-associated kinase regulator, putative (DUF1645)

hypothetical protein (DUF1645)

DNA ligase-like protein, putative (DUF1645)

protein bfr2

uncharacterized LOC100789513

uncharacterized LOC102660396

uncharacterized LOC103875183

uncharacterized LOC103831573

uncharacterized LOC103852649

uncharacterized LOC100243388

uncharacterized LOC100254241

uncharacterized LOC100852726

uncharacterized LOC11406346

uncharacterized LOC11435651

uncharacterized LOC25493766

histone H3.v1

uncharacterized LOC107898668

uncharacterized LOC107914275

uncharacterized LOC106394669

uncharacterized BNAC09G50940D

uncharacterized LOC106417664

uncharacterized LOC102616997

uncharacterized LOC102615666

uncharacterized LOC102619209

uncharacterized LOC4326582

uncharacterized LOC4327853

DUF1645 family protein

uncharacterized LOC100277000

DUF1645 family protein

uncharacterized LOC123074567

uncharacterized LOC123099458

uncharacterized LOC123074600

uncharacterized LOC123440064

uncharacterized LOC123440016

uncharacterized LOC123420586

uncharacterized LOC8064690

uncharacterized LOC8061813

uncharacterized LOC8058219

uncharacterized LOC100825091

zinc finger protein AEBP2

uncharacterized LOC100846091

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00480	Glutathione metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04016	MAPK signaling pathway - plant	2
nta04070	Phosphatidylinositol signaling system	2
nta04075	Plant hormone signal transduction	2
nta04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03018	RNA degradation	2
nta04016	MAPK signaling pathway - plant	2
nta04070	Phosphatidylinositol signaling system	2
nta04075	Plant hormone signal transduction	2
nta04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04016	MAPK signaling pathway - plant	2
sly04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00520	Amino sugar and nucleotide sugar metabolism	3
sot01240	Biosynthesis of cofactors	3
sot01250	Biosynthesis of nucleotide sugars	3
sot00040	Pentose and glucuronate interconversions	2
sot00053	Ascorbate and aldarate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04712	Circadian rhythm - plant	3
bra04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00460	Cyanoamino acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	6
mtr04626	Plant-pathogen interaction	5
mtr03040	Spliceosome	2
mtr04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00592	alpha-Linolenic acid metabolism	4
ghi00909	Sesquiterpenoid and triterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04075	Plant hormone signal transduction	12
bna04626	Plant-pathogen interaction	12
bna04016	MAPK signaling pathway - plant	8
bna04070	Phosphatidylinositol signaling system	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04016	MAPK signaling pathway - plant	4
zma04075	Plant hormone signal transduction	4
zma00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	7
zma04016	MAPK signaling pathway - plant	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04712	Circadian rhythm - plant	7
tae04016	MAPK signaling pathway - plant	3
tae04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00670	One carbon pool by folate	4
hvu00270	Cysteine and methionine metabolism	3
hvu01230	Biosynthesis of amino acids	3
hvu01240	Biosynthesis of cofactors	3
hvu00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00940	Phenylpropanoid biosynthesis	2
hvu04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00910	Nitrogen metabolism	4
sbi01310	Nitrogen cycle	4
sbi00062	Fatty acid elongation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	6
bdi04075	Plant hormone signal transduction	2

Expression

Expression pattern

Entrez Gene ID^*

107832089

107819520

107829043

104648036

101250946

102592047

102594108

107062317

836398

838981

843378

100805151

100789513

102660396

103875183

103831573

103852649

100243388

100254241

100852726

11406346

11435651

25493766

107887693

107898668

107914275

106394669

106401598

106417664

102616997

102615666

102619209

4326582

4327853

100277384

100277000

103636118

123074567

123099458

123074600

123440064

123440016

123420586

8064690

8061813

8058219

100825091

100825398

100846091

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Species	nta	sly	sot	ath	gma	bra	vvi	mtr	ghi	bna	cit	osa	zma	tae	hvu	sbi	bdi	cre	ppo
Paralog	4	2	3	3	2	3	3	3	3	3	3	3	3	3	3	3	3	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107770697 (nta-r.1 coexpression data)

Top 50 enrichment test to 107770697 (nta-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**