ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
nta-r.1	107770842	uncharacterized LOC107770842
nta-r.1	107796353	uncharacterized LOC107796353
sly-u.5	101268716	uncharacterized LOC101268716
sot-r.1	102604244	ER membrane protein complex subunit 6
sot-r.1	102595034	ER membrane protein complex subunit 6-like
ath-u.5	AT5G49540	Rab5-interacting family protein
gma-u.5	100526986	uncharacterized LOC100526986
gma-u.5	100306572	uncharacterized LOC100306572
gma-u.5	100306269	uncharacterized LOC100306269
bra-r.6	103837291	ER membrane protein complex subunit 6
bra-r.6	103874615	ER membrane protein complex subunit 6
vvi-u.5	100251751	uncharacterized LOC100251751
ppo-u.5	7485845	uncharacterized LOC7485845
ppo-u.5	7485884	uncharacterized LOC7485884
mtr-u.5	11424567	ER membrane protein complex subunit 6
mtr-u.5	11408789	ER membrane protein complex subunit 6
ghi-r.1	107910563	ER membrane protein complex subunit 6
ghi-r.1	107916222	ER membrane protein complex subunit 6
ghi-r.1	107896406	ER membrane protein complex subunit 6
bna-r.1	111211560	ER membrane protein complex subunit 6
bna-r.1	106348803	ER membrane protein complex subunit 6
cit-r.1	102608374	uncharacterized LOC102608374
osa-u.5	4324140	uncharacterized LOC4324140
zma-u.5	100383916	Rab5-interacting family protein
zma-u.5	100382435	uncharacterized LOC100382435
tae-r.2	123182989	ER membrane protein complex subunit 6
tae-r.2	123067141	ER membrane protein complex subunit 6
tae-r.2	123144559	ER membrane protein complex subunit 6
hvu-r.1	123449578	ER membrane protein complex subunit 6
sbi-r.1	8063558	ER membrane protein complex subunit 6
sbi-r.1	8063068	ER membrane protein complex subunit 6
bdi-r.1	100833793	ER membrane protein complex subunit 6
bdi-r.1	100842551	ER membrane protein complex subunit 6
cre-r.1	CHLRE_14g614250v5	uncharacterized protein

Top 50 coexpressed genes to 107770842 (nta-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107770842 (nta-r.1 coexpression data)

CoexMap"107770842"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0034975 [list] [network] protein folding in endoplasmic reticulum	(17 genes)	IEA
GO:0000045 [list] [network] autophagosome assembly	(57 genes)	IEA

GO CC

GO:0072546 [list] [network] EMC complex	(19 genes)	IEA
GO:0005783 [list] [network] endoplasmic reticulum	(923 genes)	IEA
GO:0016020 [list] [network] membrane	(5892 genes)	IEA

GO MF

Protein

XP_016445662.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 3, nucl 2, extr 1, cysk 1, nucl_plas 1, cyto_pero 1

(predict for XP_016445662.1)

Subcellular
localization
TargetP

other 9

(predict for XP_016445662.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	nta-r.1 for 107770842	nta-r.1 for 107796353	sly-u.5 for 101268716	sot-r.1 for 102604244	sot-r.1 for 102595034	ath-u.5 for AT5G49540	gma-u.5 for 100526986	gma-u.5 for 100306572	gma-u.5 for 100306269	bra-r.6 for 103837291	bra-r.6 for 103874615	vvi-u.5 for 100251751	ppo-u.5 for 7485845	ppo-u.5 for 7485884	mtr-u.5 for 11424567	mtr-u.5 for 11408789	ghi-r.1 for 107910563	ghi-r.1 for 107916222	ghi-r.1 for 107896406	bna-r.1 for 111211560	bna-r.1 for 106348803	cit-r.1 for 102608374	osa-u.5 for 4324140	zma-u.5 for 100383916	zma-u.5 for 100382435	tae-r.2 for 123182989	tae-r.2 for 123067141	tae-r.2 for 123144559	hvu-r.1 for 123449578	sbi-r.1 for 8063558	sbi-r.1 for 8063068	bdi-r.1 for 100833793	bdi-r.1 for 100842551	cre-r.1 for CHLRE_14g614250v5

Ortholog

Ortholog ID: 5593

Species

nta

sly

sot

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC107770842

uncharacterized LOC107796353

uncharacterized LOC101268716

ER membrane protein complex subunit 6

ER membrane protein complex subunit 6-like

Rab5-interacting family protein

uncharacterized LOC100526986

uncharacterized LOC100306572

uncharacterized LOC100306269

ER membrane protein complex subunit 6

uncharacterized LOC100251751

uncharacterized LOC7485845

uncharacterized LOC7485884

ER membrane protein complex subunit 6

uncharacterized LOC102608374

uncharacterized LOC4324140

Rab5-interacting family protein

uncharacterized LOC100382435

ER membrane protein complex subunit 6

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	2
nta00230	Purine metabolism	2
nta00280	Valine, leucine and isoleucine degradation	2
nta00410	beta-Alanine metabolism	2
nta00640	Propanoate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00510	N-Glycan biosynthesis	4
sly04141	Protein processing in endoplasmic reticulum	4
sly00513	Various types of N-glycan biosynthesis	3
sly03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04120	Ubiquitin mediated proteolysis	2
sot04141	Protein processing in endoplasmic reticulum	2
sot00510	N-Glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04141	Protein processing in endoplasmic reticulum	4
sot00510	N-Glycan biosynthesis	2
sot00513	Various types of N-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00510	N-Glycan biosynthesis	4
ath00513	Various types of N-glycan biosynthesis	3
ath04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	5
gma04145	Phagosome	4
gma04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	2
gma03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04145	Phagosome	4
bra03040	Spliceosome	3
bra03050	Proteasome	3
bra04130	SNARE interactions in vesicular transport	3
bra04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00020	Citrate cycle (TCA cycle)	2
vvi01200	Carbon metabolism	2
vvi01210	2-Oxocarboxylic acid metabolism	2
vvi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03050	Proteasome	4
ppo03013	Nucleocytoplasmic transport	2
ppo03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03020	RNA polymerase	4
ghi03420	Nucleotide excision repair	4
ghi04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03020	RNA polymerase	4
ghi03420	Nucleotide excision repair	4
ghi03060	Protein export	2
ghi04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00190	Oxidative phosphorylation	4
bna03018	RNA degradation	3
bna03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03018	RNA degradation	4
bna00190	Oxidative phosphorylation	2
bna03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00190	Oxidative phosphorylation	4
cit04144	Endocytosis	2
cit03060	Protein export	2
cit00510	N-Glycan biosynthesis	2
cit00513	Various types of N-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04130	SNARE interactions in vesicular transport	2
osa00510	N-Glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03050	Proteasome	2
zma04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04144	Endocytosis	5
tae00190	Oxidative phosphorylation	3
tae04142	Lysosome	3
tae04145	Phagosome	3
tae04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04144	Endocytosis	4
tae04141	Protein processing in endoplasmic reticulum	3
tae00190	Oxidative phosphorylation	3
tae04142	Lysosome	3
tae04145	Phagosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00071	Fatty acid degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00190	Oxidative phosphorylation	5
hvu04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03050	Proteasome	3
sbi03015	mRNA surveillance pathway	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00190	Oxidative phosphorylation	5
sbi00061	Fatty acid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03050	Proteasome	5
bdi04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03040	Spliceosome	5
cre03018	RNA degradation	3

Expression

Expression pattern

Entrez Gene ID^*

107770842

107796353

101268716

102604244

102595034

835015

100526986

100306572

100306269

103837291

103874615

100251751

7485845

7485884

11424567

11408789

107910563

107896406

121215495

111211560

106348803

102608374

4324140

100383916

100382435

123182989

123067141

123144559

123449578

8063558

8063068

100833793

100842551

66056188

The preparation time of this page was 0.2 [sec].


Species	nta	sly	sot	ath	gma	bra	vvi	ppo	mtr	ghi	bna	cit	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	2	1	2	1	3	2	1	2	2	3	2	1	1	2	3	1	2	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107770842 (nta-r.1 coexpression data)

Top 50 enrichment test to 107770842 (nta-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**