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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107775735   isoamylase 2, chloroplastic-like 
 nta-r.1   107797157   isoamylase 2, chloroplastic 
 sly-u.5   101250336   isoamylase 2, chloroplastic 
 sot-r.1   102577931   isoamylase 
 ath-u.5   DBE1   debranching enzyme 1 
 gma-u.5   100797949   isoamylase 2, chloroplastic 
 gma-u.5   100777953   isoamylase 2, chloroplastic 
 bra-r.6   103844518   isoamylase 2, chloroplastic 
 bra-r.6   103836621   isoamylase 2, chloroplastic 
 vvi-u.5   100244186   isoamylase 2, chloroplastic 
 ppo-u.5   112326438   isoamylase 2, chloroplastic 
 mtr-u.5   25499096   isoamylase 2, chloroplastic 
 ghi-r.1   107923869   isoamylase 2, chloroplastic 
 ghi-r.1   107912414   isoamylase 2, chloroplastic 
 bna-r.1   106423058   isoamylase 2, chloroplastic 
 bna-r.1   106401297   isoamylase 2, chloroplastic 
 bna-r.1   106399928   isoamylase 2, chloroplastic-like 
 cit-r.1   102626207   isoamylase 2, chloroplastic 
 osa-u.5   4338695   isoamylase 2, chloroplastic-like 
 zma-u.5   542679   isoamylase-type starch debranching enzyme ISO2 
 tae-r.2   123054669   isoamylase 2, chloroplastic 
 tae-r.2   123131609   isoamylase 2, chloroplastic 
 tae-r.2   101290630   isoamylase 2, chloroplastic 
 hvu-r.1   123442173   isoamylase 2, chloroplastic 
 sbi-r.1   8076863   isoamylase 2, chloroplastic 
 bdi-r.1   100825202   isoamylase 2, chloroplastic 

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Top 50 coexpressed genes to 107775735 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107775735 (nta-r.1 coexpression data)

CoexMap"107775735"


ntaLOC107775735 | Entrez gene ID : 107775735      
Species nta sly sot ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 2 1 1 1 2 2 1 1 1 2 3 1 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG nta00500 [list] [network] Starch and sucrose metabolism (286 genes)
GO BP
GO:0019252 [list] [network] starch biosynthetic process  (2 genes)  IEA  
GO CC
GO MF
GO:0019156 [list] [network] isoamylase activity  (2 genes)  IEA  
Protein XP_016450982.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  chlo 4,  nucl 1,  cysk 1,  cysk_nucl 1  (predict for XP_016450982.2)
Subcellular
localization
TargetP
chlo 3  (predict for XP_016450982.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107775735
nta-r.1
for
107797157
sly-u.5
for
101250336
sot-r.1
for
102577931
ath-u.5
for
DBE1
gma-u.5
for
100797949
gma-u.5
for
100777953
bra-r.6
for
103844518
bra-r.6
for
103836621
vvi-u.5
for
100244186
ppo-u.5
for
112326438
mtr-u.5
for
25499096
ghi-r.1
for
107923869
ghi-r.1
for
107912414
bna-r.1
for
106423058
bna-r.1
for
106401297
bna-r.1
for
106399928
cit-r.1
for
102626207
osa-u.5
for
4338695
zma-u.5
for
542679
tae-r.2
for
123054669
tae-r.2
for
123131609
tae-r.2
for
101290630
hvu-r.1
for
123442173
sbi-r.1
for
8076863
bdi-r.1
for
100825202


Ortholog ID: 9810
Species nta nta sly sot ath gma gma bra bra vvi ppo mtr ghi ghi bna bna bna cit osa zma tae tae tae hvu sbi bdi
Symbol LOC107775735 LOC107797157 LOC101250336 LOC102577931 DBE1 LOC100797949 LOC100777953 LOC103844518 LOC103836621 LOC100244186 LOC112326438 LOC25499096 LOC107923869 LOC107912414 LOC106423058 LOC106401297 LOC106399928 LOC102626207 LOC4338695 LOC542679 LOC123054669 LOC123131609 LOC101290630 LOC123442173 LOC8076863 LOC100825202
Function* isoamylase 2, chloroplastic-like isoamylase 2, chloroplastic isoamylase 2, chloroplastic isoamylase debranching enzyme 1 isoamylase 2, chloroplastic isoamylase 2, chloroplastic isoamylase 2, chloroplastic isoamylase 2, chloroplastic isoamylase 2, chloroplastic isoamylase 2, chloroplastic isoamylase 2, chloroplastic isoamylase 2, chloroplastic isoamylase 2, chloroplastic isoamylase 2, chloroplastic isoamylase 2, chloroplastic isoamylase 2, chloroplastic-like isoamylase 2, chloroplastic isoamylase 2, chloroplastic-like isoamylase-type starch debranching enzyme ISO2 isoamylase 2, chloroplastic isoamylase 2, chloroplastic isoamylase 2, chloroplastic isoamylase 2, chloroplastic isoamylase 2, chloroplastic isoamylase 2, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01240 Biosynthesis of cofactors 3
sly00350 Tyrosine metabolism 2
sly01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 5
sot00190 Oxidative phosphorylation 2
sot04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00500 Starch and sucrose metabolism 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 5
gma01200 Carbon metabolism 3
gma00670 One carbon pool by folate 3
gma00410 beta-Alanine metabolism 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00500 Starch and sucrose metabolism 8
bra00520 Amino sugar and nucleotide sugar metabolism 2
bra01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00562 Inositol phosphate metabolism 2
bra04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 3
vvi04142 Lysosome 2
vvi00520 Amino sugar and nucleotide sugar metabolism 2
vvi01250 Biosynthesis of nucleotide sugars 2
vvi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 3
ppo00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 12
ghi00520 Amino sugar and nucleotide sugar metabolism 4
ghi01250 Biosynthesis of nucleotide sugars 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 12
ghi00520 Amino sugar and nucleotide sugar metabolism 4
ghi01250 Biosynthesis of nucleotide sugars 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 14
bna00520 Amino sugar and nucleotide sugar metabolism 2
bna01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 14
bna00520 Amino sugar and nucleotide sugar metabolism 2
bna01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 14
bna00520 Amino sugar and nucleotide sugar metabolism 2
bna01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00500 Starch and sucrose metabolism 11
osa00520 Amino sugar and nucleotide sugar metabolism 3
osa01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 5
zma00710 Carbon fixation by Calvin cycle 5
zma01200 Carbon metabolism 5
zma00030 Pentose phosphate pathway 3
zma00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 12
tae00051 Fructose and mannose metabolism 3
tae00520 Amino sugar and nucleotide sugar metabolism 3
tae01250 Biosynthesis of nucleotide sugars 3
tae00220 Arginine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 15
tae00220 Arginine biosynthesis 3
tae00250 Alanine, aspartate and glutamate metabolism 3
tae01230 Biosynthesis of amino acids 3
tae00051 Fructose and mannose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 12
tae00220 Arginine biosynthesis 3
tae00250 Alanine, aspartate and glutamate metabolism 3
tae01230 Biosynthesis of amino acids 3
tae00051 Fructose and mannose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107775735 107797157 101250336 102577931 839531 100797949 100777953 103844518 103836621 100244186 112326438 25499096 107923869 107912414 106423058 106401297 106399928 102626207 4338695 542679 123054669 123131609 101290630 123442173 8076863 100825202
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