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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107776230   putative starch synthase 4, chloroplastic/amyloplastic 
 sly-u.5   100191117   starch synthase VI 
 sly-u.5   100316881   starch synthase IV 
 ath-u.5   SS4   starch synthase 4 
 gma-u.5   100804775   probable starch synthase 4, chloroplastic/amyloplastic 
 gma-u.5   100788308   probable starch synthase 4, chloroplastic/amyloplastic 
 vvi-u.5   100257130   probable starch synthase 4, chloroplastic/amyloplastic 
 vvi-u.5   100233071   starch synthase VI 
 ppo-u.5   18107883   uncharacterized LOC18107883 
 ppo-u.5   7487835   probable starch synthase 4, chloroplastic/amyloplastic 
 mtr-u.5   25493390   probable starch synthase 4, chloroplastic/amyloplastic 
 osa-u.5   4339426   probable starch synthase 4, chloroplastic/amyloplastic 
 osa-u.5   4324654   probable starch synthase 4, chloroplastic/amyloplastic 
 zma-u.5   100170236   starch synthase IV 

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Top 50 coexpressed genes to 107776230 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107776230 (nta-r.1 coexpression data)

CoexMap"107776230"


ntaLOC107776230 | Entrez gene ID : 107776230      
Species nta sly ath gma vvi ppo mtr osa zma sot hvu tae cit sbi ghi cre bna bdi bra
Paralog 1 2 1 2 2 2 1 2 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG nta00500 [list] [network] Starch and sucrose metabolism (286 genes)
GO BP
GO CC
GO MF
GO:0004373 [list] [network] alpha-1,4-glucan glucosyltransferase (UDP-glucose donor) activity  (12 genes)  IEA  
Protein XP_075089825.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  nucl 1  (predict for XP_075089825.1)
Subcellular
localization
TargetP
chlo 4  (predict for XP_075089825.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107776230

.
sly-u.5
for
100191117

.
sly-u.5
for
100316881

.
ath-u.5
for
SS4

.
gma-u.5
for
100804775

.
gma-u.5
for
100788308

.
vvi-u.5
for
100257130

.
vvi-u.5
for
100233071

.
ppo-u.5
for
18107883

.
ppo-u.5
for
7487835

.
mtr-u.5
for
25493390

.
osa-u.5
for
4339426

.
osa-u.5
for
4324654

.
zma-u.5
for
100170236

.


Ortholog ID: 6039
Species ath gma gma sly sly osa osa zma bra vvi vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre cre sbi sot cit cit bdi nta nta
Symbol SS4 LOC100788308 LOC100804775 LOC100191117 LOC100316881 LOC4324654 LOC4339426 LOC100170236 LOC103834053 LOC100257130 LOC100233071 LOC7487835 LOC18107883 LOC25493390 LOC123141968 LOC543061 LOC123448543 LOC107913770 LOC121218677 LOC106360862 LOC106430626 CHLRE_16g665800v5 CHLRE_16g663850v5 LOC8068976 LOC102579881 LOC102626137 LOC102627834 LOC100836636 LOC107766543 LOC107807888
Function* starch synthase 4 probable starch synthase 4, chloroplastic/amyloplastic probable starch synthase 4, chloroplastic/amyloplastic starch synthase VI starch synthase IV probable starch synthase 4, chloroplastic/amyloplastic probable starch synthase 4, chloroplastic/amyloplastic starch synthase IV probable starch synthase 4, chloroplastic/amyloplastic probable starch synthase 4, chloroplastic/amyloplastic starch synthase VI probable starch synthase 4, chloroplastic/amyloplastic uncharacterized LOC18107883 probable starch synthase 4, chloroplastic/amyloplastic probable starch synthase 4, chloroplastic/amyloplastic probable starch synthase 4, chloroplastic/amyloplastic probable starch synthase 4, chloroplastic/amyloplastic probable starch synthase 4, chloroplastic/amyloplastic probable starch synthase 4, chloroplastic/amyloplastic probable starch synthase 4, chloroplastic/amyloplastic probable starch synthase 4, chloroplastic/amyloplastic uncharacterized protein uncharacterized protein probable starch synthase 4, chloroplastic/amyloplastic glycogen synthase-like probable starch synthase 4, chloroplastic/amyloplastic uncharacterized LOC102627834 probable starch synthase 4, chloroplastic/amyloplastic uncharacterized LOC107766543 putative starch synthase 4, chloroplastic/amyloplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00500 Starch and sucrose metabolism 7
ath00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 4
gma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 4
gma00500 Starch and sucrose metabolism 2
gma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04142 Lysosome 2
sly00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00330 Arginine and proline metabolism 2
osa01230 Biosynthesis of amino acids 2
osa00190 Oxidative phosphorylation 2
osa04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01230 Biosynthesis of amino acids 2
bra00500 Starch and sucrose metabolism 2
bra00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 3
tae03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00480 Glutathione metabolism 4
ghi03018 RNA degradation 2
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00561 Glycerolipid metabolism 3
bna00500 Starch and sucrose metabolism 2
bna03060 Protein export 2
bna02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna02010 ABC transporters 3
bna00500 Starch and sucrose metabolism 2
bna00561 Glycerolipid metabolism 2
bna03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00010 Glycolysis / Gluconeogenesis 2
cre00030 Pentose phosphate pathway 2
cre00051 Fructose and mannose metabolism 2
cre00710 Carbon fixation by Calvin cycle 2
cre01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 4
sot00561 Glycerolipid metabolism 2
sot00053 Ascorbate and aldarate metabolism 2
sot00562 Inositol phosphate metabolism 2
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00630 Glyoxylate and dicarboxylate metabolism 3
bdi01200 Carbon metabolism 3
bdi00260 Glycine, serine and threonine metabolism 2
bdi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta02010 ABC transporters 2
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
nta00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827550 100788308 100804775 100191117 100316881 4324654 4339426 100170236 103834053 100257130 100233071 7487835 18107883 25493390 123141968 543061 123448543 107913770 121218677 106360862 106430626 5727013 5727030 8068976 102579881 102626137 102627834 100836636 107766543 107807888
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