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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107777531   transcription factor bHLH80 
 nta-r.1   107830484   transcription factor bHLH80 
 sly-u.5   101256189   transcription factor bHLH81-like 
 sot-r.1   102596464   transcription factor bHLH81-like 
 ath-u.5   FBH2   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-u.5   FBH1   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 gma-u.5   100527723   uncharacterized LOC100527723 
 bra-r.6   103868826   transcription factor bHLH80 
 bra-r.6   103833586   transcription factor bHLH80 
 vvi-u.5   100252707   transcription factor bHLH80 
 ppo-u.5   7467403   transcription factor bHLH81 
 ppo-u.5   18104406   transcription factor bHLH80 
 mtr-u.5   25491795   transcription factor bHLH80 
 ghi-r.1   107918573   transcription factor bHLH81 
 ghi-r.1   107895069   transcription factor bHLH81 
 bna-r.1   106417657   transcription factor bHLH80 
 bna-r.1   106451829   transcription factor bHLH80 
 bna-r.1   106424783   transcription factor bHLH80-like 
 cit-r.1   102616664   transcription factor bHLH80 

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Top 50 coexpressed genes to 107777531 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107777531 (nta-r.1 coexpression data)

CoexMap"107777531"


ntaLOC107777531 | Entrez gene ID : 107777531      
Species nta sly sot ath gma bra vvi ppo mtr ghi bna cit bdi osa tae zma cre sbi hvu
Paralog 2 1 1 2 1 2 1 2 1 2 3 1 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (712 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (4980 genes)  IEA  
GO MF
GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding  (297 genes)  IEA  
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific  (394 genes)  IEA  
GO:0046983 [list] [network] protein dimerization activity  (1129 genes)  IEA  
Protein XP_016453059.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  chlo 1,  plas 1  (predict for XP_016453059.1)
Subcellular
localization
TargetP
mito 7  (predict for XP_016453059.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107777531
nta-r.1
for
107830484
sly-u.5
for
101256189
sot-r.1
for
102596464
ath-u.5
for
FBH2
ath-u.5
for
FBH1
gma-u.5
for
100527723
bra-r.6
for
103868826
bra-r.6
for
103833586
vvi-u.5
for
100252707
ppo-u.5
for
7467403
ppo-u.5
for
18104406
mtr-u.5
for
25491795
ghi-r.1
for
107918573
ghi-r.1
for
107895069
bna-r.1
for
106417657
bna-r.1
for
106451829
bna-r.1
for
106424783
cit-r.1
for
102616664


Ortholog ID: 10124
Species nta nta sly sot ath ath gma bra bra vvi ppo ppo mtr ghi ghi bna bna bna cit
Symbol LOC107777531 LOC107830484 LOC101256189 LOC102596464 FBH2 FBH1 LOC100527723 LOC103868826 LOC103833586 LOC100252707 LOC7467403 LOC18104406 LOC25491795 LOC107918573 LOC107895069 LOC106451829 LOC106418755 LOC106402710 LOC102616664
Function* transcription factor bHLH80 transcription factor bHLH80 transcription factor bHLH81-like transcription factor bHLH81-like basic helix-loop-helix (bHLH) DNA-binding superfamily protein basic helix-loop-helix (bHLH) DNA-binding superfamily protein uncharacterized LOC100527723 transcription factor bHLH80 transcription factor bHLH80 transcription factor bHLH80 transcription factor bHLH81 transcription factor bHLH80 transcription factor bHLH80 transcription factor bHLH81 transcription factor bHLH81 transcription factor bHLH80 transcription factor bHLH80-like transcription factor bHLH80-like transcription factor bHLH80
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00620 Pyruvate metabolism 2
nta00710 Carbon fixation by Calvin cycle 2
nta01200 Carbon metabolism 2
nta04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00620 Pyruvate metabolism 2
nta00710 Carbon fixation by Calvin cycle 2
nta01200 Carbon metabolism 2
nta04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04712 Circadian rhythm - plant 3
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 2
ath04070 Phosphatidylinositol signaling system 2
ath04075 Plant hormone signal transduction 2
ath04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03083 Polycomb repressive complex 2
ppo04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00561 Glycerolipid metabolism 2
ppo00510 N-Glycan biosynthesis 2
ppo00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00280 Valine, leucine and isoleucine degradation 6
mtr01210 2-Oxocarboxylic acid metabolism 3
mtr00640 Propanoate metabolism 2
mtr00785 Lipoic acid metabolism 2
mtr00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107777531 107830484 101256189 102596464 826499 840438 100527723 103868826 103833586 100252707 7467403 18104406 25491795 107918573 107895069 106451829 106418755 106402710 102616664
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