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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107788913   pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like 
 nta-r.1   107798736   pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like 
 sly-u.5   101267812   pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like 
 sot-r.1   102602550   pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like 
 gma-u.5   100789101   pentatricopeptide repeat-containing protein At2g22410, mitochondrial 
 vvi-u.5   100247077   pentatricopeptide repeat-containing protein At2g22410, mitochondrial 
 mtr-u.5   25498886   pentatricopeptide repeat-containing protein At2g22410, mitochondrial 
 ghi-r.1   107892059   pentatricopeptide repeat-containing protein At2g29760, chloroplastic 
 ghi-r.1   107936467   pentatricopeptide repeat-containing protein At2g29760, chloroplastic 
 cit-r.1   102616376   putative pentatricopeptide repeat-containing protein At3g15930 
 osa-u.5   4327484   pentatricopeptide repeat-containing protein At2g22410, mitochondrial 
 zma-u.5   103651080   pentatricopeptide repeat-containing protein At2g22410, mitochondrial 
 tae-r.2   123079547   pentatricopeptide repeat-containing protein At2g22410, mitochondrial 
 tae-r.2   123057009   pentatricopeptide repeat-containing protein At1g31430-like 
 hvu-r.1   123444695   putative pentatricopeptide repeat-containing protein At3g15930 
 sbi-r.1   8055290   pentatricopeptide repeat-containing protein At2g22410, mitochondrial 
 bdi-r.1   100833558   putative pentatricopeptide repeat-containing protein At3g15930 

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Top 50 coexpressed genes to 107788913 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107788913 (nta-r.1 coexpression data)

CoexMap"107778462"


ntaLOC107778462 | Entrez gene ID : 107778462      
Species nta sly sot gma vvi mtr ghi cit osa zma tae hvu sbi bdi bra ppo ath cre bna
Paralog 2 1 1 1 1 1 2 1 1 1 2 1 1 1 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (732 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (2607 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_016454206.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 10  (predict for XP_016454206.1)
Subcellular
localization
TargetP
other 8,  scret 3  (predict for XP_016454206.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107788913
nta-r.1
for
107798736
sly-u.5
for
101267812
sot-r.1
for
102602550
gma-u.5
for
100789101
vvi-u.5
for
100247077
mtr-u.5
for
25498886
ghi-r.1
for
107892059
ghi-r.1
for
107936467
cit-r.1
for
102616376
osa-u.5
for
4327484
zma-u.5
for
103651080
tae-r.2
for
123079547
tae-r.2
for
123057009
hvu-r.1
for
123444695
sbi-r.1
for
8055290
bdi-r.1
for
100833558


Ortholog ID: 12536
Species nta nta sly sot gma vvi mtr ghi ghi cit osa zma tae tae hvu sbi bdi
Symbol LOC107788913 LOC107798736 LOC101267812 LOC102602550 LOC100789101 LOC100247077 LOC25498886 LOC107892059 LOC107936467 LOC102616376 LOC4327484 LOC103651080 LOC123079547 LOC123057009 LOC123444695 LOC8055290 LOC100833558
Function* pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like pentatricopeptide repeat-containing protein At2g22410, mitochondrial pentatricopeptide repeat-containing protein At2g22410, mitochondrial pentatricopeptide repeat-containing protein At2g22410, mitochondrial pentatricopeptide repeat-containing protein At2g29760, chloroplastic pentatricopeptide repeat-containing protein At2g29760, chloroplastic putative pentatricopeptide repeat-containing protein At3g15930 pentatricopeptide repeat-containing protein At2g22410, mitochondrial pentatricopeptide repeat-containing protein At2g22410, mitochondrial pentatricopeptide repeat-containing protein At2g22410, mitochondrial pentatricopeptide repeat-containing protein At1g31430-like putative pentatricopeptide repeat-containing protein At3g15930 pentatricopeptide repeat-containing protein At2g22410, mitochondrial putative pentatricopeptide repeat-containing protein At3g15930
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 3
hvu04141 Protein processing in endoplasmic reticulum 2
hvu03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107788913 107798736 101267812 102602550 100789101 100247077 25498886 107892059 107936467 102616376 4327484 103651080 123079547 123057009 123444695 8055290 100833558
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