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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107821675   rop guanine nucleotide exchange factor 12 
 nta-r.1   107820833   rop guanine nucleotide exchange factor 12-like 
 nta-r.1   107815350   rop guanine nucleotide exchange factor 12-like 
 sly-u.5   KPP   pollen-specific kinase partner protein 
 sly-u.5   101248400   rop guanine nucleotide exchange factor 12 
 sly-u.5   101251652   rop guanine nucleotide exchange factor 9 
 sot-r.1   102600973   rop guanine nucleotide exchange factor 12 
 sot-r.1   102599399   rho guanine nucleotide exchange factor 8-like 
 ath-u.5   ROPGEF11   rop guanine nucleotide exchange factor-like protein 
 gma-u.5   100787455   rho guanine nucleotide exchange factor 8 
 gma-u.5   100778231   rho guanine nucleotide exchange factor 8 
 gma-u.5   100777496   rop guanine nucleotide exchange factor 12 
 vvi-u.5   100261758   rho guanine nucleotide exchange factor 8 
 vvi-u.5   100260990   rho guanine nucleotide exchange factor 8 
 mtr-u.5   25491404   rop guanine nucleotide exchange factor 12 
 mtr-u.5   11442005   rop guanine nucleotide exchange factor 12 
 ghi-r.1   107906525   rop guanine nucleotide exchange factor 12 
 cit-r.1   102616233   rop guanine nucleotide exchange factor 12 
 osa-u.5   4328986   rop guanine nucleotide exchange factor 10 
 osa-u.5   4339594   rop guanine nucleotide exchange factor 9 
 osa-u.5   4325619   rop guanine nucleotide exchange factor 11 
 zma-u.5   100274290   uncharacterized LOC100274290 
 zma-u.5   103626931   rop guanine nucleotide exchange factor 10 
 zma-u.5   100216854   uncharacterized LOC100216854 
 tae-r.2   123127445   rho guanine nucleotide exchange factor 8-like 
 tae-r.2   123058589   rop guanine nucleotide exchange factor 9 
 tae-r.2   123061900   rho guanine nucleotide exchange factor 8 
 hvu-r.1   123450072   rop guanine nucleotide exchange factor 9-like 
 bdi-r.1   100829485   rop guanine nucleotide exchange factor 9 
 bdi-r.1   100836854   rop guanine nucleotide exchange factor 9 

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Top 50 coexpressed genes to 107821675 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107821675 (nta-r.1 coexpression data)

CoexMap"107778679"


ntaLOC107778679 | Entrez gene ID : 107778679      
Species nta sly sot ath gma vvi mtr ghi cit osa zma tae hvu bdi bna ppo cre sbi bra
Paralog 3 3 2 1 3 2 2 1 1 3 3 3 1 2 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005085 [list] [network] guanyl-nucleotide exchange factor activity  (72 genes)  IEA  
Protein XP_016454450.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 2,  cysk 1,  golg 1  (predict for XP_016454450.1)
Subcellular
localization
TargetP
other 6  (predict for XP_016454450.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107821675
nta-r.1
for
107820833
nta-r.1
for
107815350
sly-u.5
for
KPP
sly-u.5
for
101248400
sly-u.5
for
101251652
sot-r.1
for
102600973
sot-r.1
for
102599399
ath-u.5
for
ROPGEF11
gma-u.5
for
100787455
gma-u.5
for
100778231
gma-u.5
for
100777496
vvi-u.5
for
100261758
vvi-u.5
for
100260990
mtr-u.5
for
25491404
mtr-u.5
for
11442005
ghi-r.1
for
107906525
cit-r.1
for
102616233
osa-u.5
for
4328986
osa-u.5
for
4339594
osa-u.5
for
4325619
zma-u.5
for
100274290
zma-u.5
for
103626931
zma-u.5
for
100216854
tae-r.2
for
123127445
tae-r.2
for
123058589
tae-r.2
for
123061900
hvu-r.1
for
123450072
bdi-r.1
for
100829485
bdi-r.1
for
100836854


Ortholog ID: 905
Species nta nta nta sly sly sot sot ath gma gma gma vvi vvi mtr mtr ghi ghi ghi cit osa osa osa zma zma zma tae bdi bdi
Symbol LOC107820833 LOC107805255 LOC107778855 KPP LOC101251652 LOC102600973 LOC102584199 ROPGEF12 LOC100777496 LOC100812078 LOC112998793 LOC100261758 LOC100260990 LOC25491404 LOC11442005 LOC107933017 LOC107949595 LOC107952141 LOC102616233 LOC4328986 LOC4339594 LOC4325510 LOC100274290 LOC100216854 LOC103651184 LOC123065602 LOC100829485 LOC100836854
Function* rop guanine nucleotide exchange factor 12-like rho guanine nucleotide exchange factor 8 rho guanine nucleotide exchange factor 8-like pollen-specific kinase partner protein rop guanine nucleotide exchange factor 9 rop guanine nucleotide exchange factor 12 rop guanine nucleotide exchange factor 12-like RHO guanyl-nucleotide exchange factor 12 rop guanine nucleotide exchange factor 12 rop guanine nucleotide exchange factor 12 rop guanine nucleotide exchange factor 12 rho guanine nucleotide exchange factor 8 rho guanine nucleotide exchange factor 8 rop guanine nucleotide exchange factor 12 rop guanine nucleotide exchange factor 12 rho guanine nucleotide exchange factor 8 rop guanine nucleotide exchange factor 12 rop guanine nucleotide exchange factor 12 rop guanine nucleotide exchange factor 12 rop guanine nucleotide exchange factor 10 rop guanine nucleotide exchange factor 9 rop guanine nucleotide exchange factor 9 uncharacterized LOC100274290 uncharacterized LOC100216854 rop guanine nucleotide exchange factor 9 rop guanine nucleotide exchange factor 9 rop guanine nucleotide exchange factor 9 rop guanine nucleotide exchange factor 9
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 3
nta00770 Pantothenate and CoA biosynthesis 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04148 Efferocytosis 2
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00940 Phenylpropanoid biosynthesis 8
sot00941 Flavonoid biosynthesis 4
sot00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 4
sot00010 Glycolysis / Gluconeogenesis 3
sot00071 Fatty acid degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 2
gma00280 Valine, leucine and isoleucine degradation 2
gma00650 Butanoate metabolism 2
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 2
gma00280 Valine, leucine and isoleucine degradation 2
gma00650 Butanoate metabolism 2
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 6
vvi00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
mtr04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00040 Pentose and glucuronate interconversions 3
mtr00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00910 Nitrogen metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00910 Nitrogen metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 4
zma04016 MAPK signaling pathway - plant 3
zma00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04626 Plant-pathogen interaction 2
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00480 Glutathione metabolism 4
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00940 Phenylpropanoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107820833 107805255 107778855 778332 101251652 102600973 102584199 844325 100777496 100812078 112998793 100261758 100260990 25491404 11442005 107933017 107949595 107952141 102616233 4328986 4339594 4325510 100274290 100216854 103651184 123065602 100829485 100836854
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