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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107779853   pentatricopeptide repeat-containing protein At1g52640, mitochondrial-like 
 sly-u.5   101263504   pentatricopeptide repeat-containing protein At1g52640, mitochondrial 
 gma-u.5   100810899   pentatricopeptide repeat-containing protein At1g52640, mitochondrial 
 gma-u.5   100794364   pentatricopeptide repeat-containing protein At1g52640, mitochondrial 
 ppo-u.5   7468366   pentatricopeptide repeat-containing protein At1g52640, mitochondrial 
 mtr-u.5   11411146   pentatricopeptide repeat-containing protein At1g52640, mitochondrial 
 osa-u.5   9271232   heat shock factor-binding protein 
 zma-u.5   541966   empty pericarp 2 

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Top 50 coexpressed genes to 107779853 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107779853 (nta-r.1 coexpression data)

CoexMap"107779853"


ntaLOC107779853 | Entrez gene ID : 107779853      
Species nta sly gma ppo mtr osa zma bdi hvu bra vvi cit bna ath sbi ghi sot cre tae
Paralog 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0007005 [list] [network] mitochondrion organization  (150 genes)  IEA  
GO:0006396 [list] [network] RNA processing  (1135 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (1174 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (573 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_016455839.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 6,  cyto_mito 4,  chlo 2,  nucl 1  (predict for XP_016455839.1)
Subcellular
localization
TargetP
mito 9  (predict for XP_016455839.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107779853
sly-u.5
for
101263504
gma-u.5
for
100810899
gma-u.5
for
100794364
ppo-u.5
for
7468366
mtr-u.5
for
11411146
osa-u.5
for
9271232
zma-u.5
for
541966


Ortholog ID: 9840
Species nta nta sly sot gma gma bra ppo mtr ghi ghi cit osa zma tae tae hvu sbi bdi
Symbol LOC107779853 LOC107765676 LOC101263504 LOC102594967 LOC100810899 LOC100794364 LOC103871199 LOC7468366 LOC11411146 LOC107904581 LOC107923163 LOC102629893 LOC9271232 LOC541966 LOC123103624 LOC123111838 LOC123395556 LOC8056184 LOC104584669
Function* pentatricopeptide repeat-containing protein At1g52640, mitochondrial-like pentatricopeptide repeat-containing protein At1g52640, mitochondrial-like pentatricopeptide repeat-containing protein At1g52640, mitochondrial pentatricopeptide repeat-containing protein At1g52640, mitochondrial pentatricopeptide repeat-containing protein At1g52640, mitochondrial pentatricopeptide repeat-containing protein At1g52640, mitochondrial pentatricopeptide repeat-containing protein At1g52640, mitochondrial pentatricopeptide repeat-containing protein At1g52640, mitochondrial pentatricopeptide repeat-containing protein At1g52640, mitochondrial pentatricopeptide repeat-containing protein At1g52640, mitochondrial-like pentatricopeptide repeat-containing protein At1g52640, mitochondrial pentatricopeptide repeat-containing protein At1g52640, mitochondrial heat shock factor-binding protein empty pericarp 2 heat shock factor-binding protein heat shock factor-binding protein heat shock factor-binding protein-like pentatricopeptide repeat-containing protein At1g52640, mitochondrial heat shock factor-binding protein 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03008 Ribosome biogenesis in eukaryotes 2
gma03020 RNA polymerase 2
gma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 3
zma04120 Ubiquitin mediated proteolysis 3
zma03015 mRNA surveillance pathway 2
zma03083 Polycomb repressive complex 2
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 2
hvu04145 Phagosome 2
hvu04148 Efferocytosis 2
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04142 Lysosome 2
sbi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 10
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107779853 107765676 101263504 102594967 100810899 100794364 103871199 7468366 11411146 107904581 107923163 102629893 9271232 541966 123103624 123111838 123395556 8056184 104584669
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