ATTED-II : GeneCoexpression result

Species	Gene	Description
nta-r.1	107784817	putative U-box domain-containing protein 42
sly-u.5	101256674	putative U-box domain-containing protein 42
vvi-u.5	100258226	putative U-box domain-containing protein 42
osa-u.5	4330595	putative U-box domain-containing protein 42
osa-u.5	4340750	putative U-box domain-containing protein 42
zma-u.5	103654019	putative U-box domain-containing protein 42
zma-u.5	100281455	ubiquitin-protein ligase

functional annotation

KEGG

GO BP

GO:0016567 [list] [network] protein ubiquitination

(573 genes)

IEA

GO CC

GO MF

GO:0004842 [list] [network] ubiquitin-protein transferase activity	(660 genes)	IEA
GO:0005515 [list] [network] protein binding	(7685 genes)	IEA

Protein

XP_016461486.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 3, nucl 2, cysk_nucl 1, extr 1, cyto 1, mito 1, plas 1, vacu 1, mito_plas 1, cyto_plas 1

(predict for XP_016461486.1)

Subcellular
localization
TargetP

other 8

(predict for XP_016461486.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	nta-r.1 for 107784817	sly-u.5 for 101256674	vvi-u.5 for 100258226	osa-u.5 for 4330595	osa-u.5 for 4340750	zma-u.5 for 103654019	zma-u.5 for 100281455

Ortholog ID: 7851

Species

nta

sly

sot

bra

vvi

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

putative U-box domain-containing protein 42

ubiquitin-protein ligase

putative U-box domain-containing protein 42

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00940	Phenylpropanoid biosynthesis	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04626	Plant-pathogen interaction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi02010	ABC transporters	4
ghi04981	Folate transport and metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00996	Biosynthesis of various alkaloids	2
cit00380	Tryptophan metabolism	2
cit00940	Phenylpropanoid biosynthesis	2
cit02010	ABC transporters	2
cit04981	Folate transport and metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi02010	ABC transporters	2
bdi04981	Folate transport and metabolism	2
bdi00040	Pentose and glucuronate interconversions	2

Expression

Expression pattern

Entrez Gene ID^*

107784817

107785600

101256674

102598727

103831304

100258226

107920190

106402669

106354049

102630565

4340750

4330595

100281455

103654019

123150104

123168625

123412278

123401919

8076391

8077705

100826661

100829374

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 107784817 (nta-r.1 coexpression data)

Top 50 enrichment test to 107784817 (nta-r.1 coexpression data)


Species	nta	sly	vvi	osa	zma	bdi	mtr	bra	hvu	cit	gma	bna	ath	ppo	sbi	ghi	sot	cre	tae
Paralog	1	1	1	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107784817 (nta-r.1 coexpression data)

Top 50 enrichment test to 107784817 (nta-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**