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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107785389   pentatricopeptide repeat-containing protein At4g21170-like 
 nta-r.1   107819374   pentatricopeptide repeat-containing protein At4g21170-like 
 sly-u.5   101258435   pentatricopeptide repeat-containing protein At4g21170 
 sot-r.1   102584736   pentatricopeptide repeat-containing protein At4g21170 
 ath-u.5   AT4G21170   Tetratricopeptide repeat (TPR)-like superfamily protein 
 bra-r.6   103858793   pentatricopeptide repeat-containing protein At4g21170 
 vvi-u.5   100262439   pentatricopeptide repeat-containing protein At4g21170 
 ppo-u.5   7479086   pentatricopeptide repeat-containing protein At4g21170 
 ghi-r.1   107958251   pentatricopeptide repeat-containing protein At4g21170 
 bna-r.1   106375695   pentatricopeptide repeat-containing protein At4g21170 
 bna-r.1   106440332   pentatricopeptide repeat-containing protein At4g21170-like 
 cit-r.1   102629430   pentatricopeptide repeat-containing protein At4g21170 

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Top 50 coexpressed genes to 107785389 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107785389 (nta-r.1 coexpression data)

CoexMap"107785389"


ntaLOC107785389 | Entrez gene ID : 107785389      
Species nta sly sot ath bra vvi ppo ghi bna cit osa bdi tae zma mtr sbi hvu cre gma
Paralog 2 1 1 1 1 1 1 1 2 1 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003729 [list] [network] mRNA binding  (573 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_016462167.1 [sequence] [blastp]
XP_016462168.1 [sequence] [blastp]
XP_016462169.1 [sequence] [blastp]
XP_016462170.1 [sequence] [blastp]
XP_016462171.1 [sequence] [blastp]
XP_016462172.1 [sequence] [blastp]
XP_016462173.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 1,  nucl 1,  cyto_mito 1  (predict for XP_016462167.1)
chlo 6,  mito 1,  nucl 1,  cyto_mito 1  (predict for XP_016462168.1)
chlo 6,  mito 1,  nucl 1,  cyto_mito 1  (predict for XP_016462169.1)
chlo 6,  mito 1,  nucl 1,  cyto_mito 1  (predict for XP_016462170.1)
chlo 6,  mito 1,  nucl 1,  cyto_mito 1  (predict for XP_016462171.1)
chlo 6,  mito 1,  nucl 1,  cyto_mito 1  (predict for XP_016462172.1)
chlo 6,  mito 1,  nucl 1,  cyto_mito 1  (predict for XP_016462173.1)
Subcellular
localization
TargetP
chlo 4  (predict for XP_016462167.1)
chlo 4  (predict for XP_016462168.1)
chlo 4  (predict for XP_016462169.1)
chlo 4  (predict for XP_016462170.1)
chlo 4  (predict for XP_016462171.1)
chlo 4  (predict for XP_016462172.1)
chlo 4  (predict for XP_016462173.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107785389
nta-r.1
for
107819374
sly-u.5
for
101258435
sot-r.1
for
102584736
ath-u.5
for
AT4G21170
bra-r.6
for
103858793
vvi-u.5
for
100262439
ppo-u.5
for
7479086
ghi-r.1
for
107958251
bna-r.1
for
106375695
bna-r.1
for
106440332
cit-r.1
for
102629430


Ortholog ID: 14038
Species nta nta sly sot ath bra vvi ppo ghi bna bna cit
Symbol LOC107785389 LOC107819374 LOC101258435 LOC102584736 AT4G21170 LOC103858793 LOC100262439 LOC7479086 LOC107958251 LOC106375695 LOC106440332 LOC102629430
Function* pentatricopeptide repeat-containing protein At4g21170-like pentatricopeptide repeat-containing protein At4g21170-like pentatricopeptide repeat-containing protein At4g21170 pentatricopeptide repeat-containing protein At4g21170 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At4g21170 pentatricopeptide repeat-containing protein At4g21170 pentatricopeptide repeat-containing protein At4g21170 pentatricopeptide repeat-containing protein At4g21170 pentatricopeptide repeat-containing protein At4g21170 pentatricopeptide repeat-containing protein At4g21170-like pentatricopeptide repeat-containing protein At4g21170
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03060 Protein export 2
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03060 Protein export 2
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04016 MAPK signaling pathway - plant 2
cit04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107785389 107819374 101258435 102584736 827865 103858793 100262439 7479086 107958251 106375695 106440332 102629430
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