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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107785476   polyadenylate-binding protein-interacting protein 12-like 
 nta-r.1   107818197   polyadenylate-binding protein-interacting protein 12 
 nta-r.1   107768645   polyadenylate-binding protein-interacting protein 11 
 nta-r.1   107772016   polyadenylate-binding protein-interacting protein 11 
 sly-u.5   101247410   polyadenylate-binding protein-interacting protein 12 
 sly-u.5   101256421   polyadenylate-binding protein-interacting protein 9 
 sly-u.5   109119827   polyadenylate-binding protein-interacting protein 12 
 sot-r.1   102583860   polyadenylate-binding protein-interacting protein 11-like 
 sot-r.1   102587489   polyadenylate-binding protein-interacting protein 12-like 
 ath-u.5   CID9   CTC-interacting domain 9 
 ath-u.5   CID12   CTC-interacting domain 12 
 ath-u.5   CID11   CTC-interacting domain 11 
 gma-u.5   100779109   polyadenylate-binding protein, cytoplasmic and nuclear-like 
 gma-u.5   100787572   polyadenylate-binding protein-interacting protein 12 
 gma-u.5   100800126   polyadenylate-binding protein-interacting protein 12 
 bra-r.6   117125894   polyadenylate-binding protein-interacting protein 8-like 
 bra-r.6   103870020   polyadenylate-binding protein-interacting protein 9 
 bra-r.6   103868414   polyadenylate-binding protein-interacting protein 8 
 vvi-u.5   100245327   polyadenylate-binding protein-interacting protein 12 
 vvi-u.5   100251410   polyadenylate-binding protein-interacting protein 9 
 vvi-u.5   100261591   polyadenylate-binding protein-interacting protein 11 
 ppo-u.5   7462994   polyadenylate-binding protein-interacting protein 9 
 ppo-u.5   7455039   polyadenylate-binding protein-interacting protein 12 
 mtr-u.5   25487066   polyadenylate-binding protein-interacting protein 9 
 mtr-u.5   11421672   polyadenylate-binding protein-interacting protein 12 
 mtr-u.5   11444764   polyadenylate-binding protein-interacting protein 12 
 ghi-r.1   107911784   polyadenylate-binding protein-interacting protein 11 
 ghi-r.1   107909480   polyadenylate-binding protein-interacting protein 10 
 bna-r.1   106345798   polyadenylate-binding protein-interacting protein 8-like 
 bna-r.1   106438815   polyadenylate-binding protein-interacting protein 12 
 bna-r.1   106431497   polyadenylate-binding protein-interacting protein 8-like 
 cit-r.1   102629091   polyadenylate-binding protein-interacting protein 12-like 
 cit-r.1   102625912   polyadenylate-binding protein-interacting protein 9 
 cit-r.1   102609458   polyadenylate-binding protein-interacting protein 12 
 osa-u.5   4328858   polyadenylate-binding protein-interacting protein 8 
 osa-u.5   4325535   polyadenylate-binding protein-interacting protein 9 
 osa-u.5   4344515   polyadenylate-binding protein-interacting protein 11 
 zma-u.5   103638760   polyadenylate-binding protein-interacting protein 11 
 zma-u.5   100501201   Polyadenylate-binding protein-interacting protein 10 
 zma-u.5   100283708   CID11 
 tae-r.2   123147556   polyadenylate-binding protein-interacting protein 11 
 tae-r.2   123060636   polyadenylate-binding protein-interacting protein 11 
 tae-r.2   123169819   polyadenylate-binding protein-interacting protein 8-like 
 hvu-r.1   123406978   polyadenylate-binding protein-interacting protein 11-like 
 hvu-r.1   123407427   polyadenylate-binding protein-interacting protein 8-like 
 hvu-r.1   123407665   polyadenylate-binding protein-interacting protein 8-like 
 sbi-r.1   8066099   polyadenylate-binding protein-interacting protein 12 
 sbi-r.1   8072681   polyadenylate-binding protein-interacting protein 8 
 sbi-r.1   110434929   polyadenylate-binding protein-interacting protein 8-like 
 bdi-r.1   100821818   polyadenylate-binding protein-interacting protein 11 
 bdi-r.1   100835921   polyadenylate-binding protein-interacting protein 8 
 bdi-r.1   100841044   polyadenylate-binding protein-interacting protein 11 
 cre-r.1   CHLRE_10g439700v5   uncharacterized protein 

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Top 50 coexpressed genes to 107785476 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107785476 (nta-r.1 coexpression data)

CoexMap"107785476"


ntaLOC107785476 | Entrez gene ID : 107785476      
Species nta sly sot ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 4 3 2 3 3 3 3 2 3 2 3 3 3 3 3 3 3 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (2607 genes)  IEA  
Protein XP_016462279.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 3,  cyto_pero 3,  cyto_E.R. 3  (predict for XP_016462279.1)
Subcellular
localization
TargetP
other 6,  chlo 4  (predict for XP_016462279.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107785476
nta-r.1
for
107818197
nta-r.1
for
107768645
nta-r.1
for
107772016
sly-u.5
for
101247410
sly-u.5
for
101256421
sly-u.5
for
109119827
sot-r.1
for
102583860
sot-r.1
for
102587489
ath-u.5
for
CID9
ath-u.5
for
CID12
ath-u.5
for
CID11
gma-u.5
for
100779109
gma-u.5
for
100787572
gma-u.5
for
100800126
bra-r.6
for
117125894
bra-r.6
for
103870020
bra-r.6
for
103868414
vvi-u.5
for
100245327
vvi-u.5
for
100251410
vvi-u.5
for
100261591
ppo-u.5
for
7462994
ppo-u.5
for
7455039
mtr-u.5
for
25487066
mtr-u.5
for
11421672
mtr-u.5
for
11444764
ghi-r.1
for
107911784
ghi-r.1
for
107909480
bna-r.1
for
106345798
bna-r.1
for
106438815
bna-r.1
for
106431497
cit-r.1
for
102629091
cit-r.1
for
102625912
cit-r.1
for
102609458
osa-u.5
for
4328858
osa-u.5
for
4325535
osa-u.5
for
4344515
zma-u.5
for
103638760
zma-u.5
for
100501201
zma-u.5
for
100283708
tae-r.2
for
123147556
tae-r.2
for
123060636
tae-r.2
for
123169819
hvu-r.1
for
123406978
hvu-r.1
for
123407427
hvu-r.1
for
123407665
sbi-r.1
for
8066099
sbi-r.1
for
8072681
sbi-r.1
for
110434929
bdi-r.1
for
100821818
bdi-r.1
for
100835921
bdi-r.1
for
100841044
cre-r.1
for
CHLRE_10g439700v5


Ortholog ID: 504
Species nta nta nta sly sly sly sot sot ath ath ath gma gma gma bra bra vvi vvi vvi ppo ppo mtr mtr mtr ghi ghi ghi bna cit cit cit osa osa zma zma tae tae tae hvu hvu hvu sbi sbi sbi bdi bdi bdi cre
Symbol LOC107785476 LOC107831827 LOC107824402 LOC109119827 LOC101266798 LOC101266229 LOC102583860 LOC102588248 CID9 CID12 CID8 LOC100779109 LOC100787572 LOC100818291 LOC117125894 LOC103870020 LOC100245327 LOC100251410 LOC100261591 LOC7455039 LOC18095398 LOC25487066 LOC11421672 LOC11444764 LOC107923716 LOC107923717 LOC107923718 LOC106431497 LOC102629091 LOC102625912 LOC102609458 LOC4328858 LOC107281429 LOC100283708 LOC103642930 LOC123147556 LOC123169819 LOC123069239 LOC123406978 LOC123407427 LOC123407665 LOC8066099 LOC110434929 LOC8079530 LOC100821818 LOC100835921 LOC100841044 CHLRE_10g439700v5
Function* polyadenylate-binding protein-interacting protein 12-like polyadenylate-binding protein-interacting protein 8-like polyadenylate-binding protein-interacting protein 8 polyadenylate-binding protein-interacting protein 12 polyadenylate-binding protein-interacting protein 8 polyadenylate-binding protein-interacting protein 12 polyadenylate-binding protein-interacting protein 11-like polyadenylate-binding protein-interacting protein 8-like CTC-interacting domain 9 CTC-interacting domain 12 CTC-interacting domain 8 polyadenylate-binding protein, cytoplasmic and nuclear-like polyadenylate-binding protein-interacting protein 12 polyadenylate-binding protein-interacting protein 9 polyadenylate-binding protein-interacting protein 8-like polyadenylate-binding protein-interacting protein 9 polyadenylate-binding protein-interacting protein 12 polyadenylate-binding protein-interacting protein 9 polyadenylate-binding protein-interacting protein 11 polyadenylate-binding protein-interacting protein 12 polyadenylate-binding protein-interacting protein 9 polyadenylate-binding protein-interacting protein 9 polyadenylate-binding protein-interacting protein 12 polyadenylate-binding protein-interacting protein 12 polyadenylate-binding protein-interacting protein 11 polyadenylate-binding protein-interacting protein 11 polyadenylate-binding protein-interacting protein 11 polyadenylate-binding protein-interacting protein 8-like polyadenylate-binding protein-interacting protein 12-like polyadenylate-binding protein-interacting protein 9 polyadenylate-binding protein-interacting protein 12 polyadenylate-binding protein-interacting protein 8 polyadenylate-binding protein-interacting protein 8 CID11 polyadenylate-binding protein-interacting protein 11 polyadenylate-binding protein-interacting protein 11 polyadenylate-binding protein-interacting protein 8-like polyadenylate-binding protein-interacting protein 11 polyadenylate-binding protein-interacting protein 11-like polyadenylate-binding protein-interacting protein 8-like polyadenylate-binding protein-interacting protein 8-like polyadenylate-binding protein-interacting protein 12 polyadenylate-binding protein-interacting protein 8-like polyadenylate-binding protein-interacting protein 9 polyadenylate-binding protein-interacting protein 11 polyadenylate-binding protein-interacting protein 8 polyadenylate-binding protein-interacting protein 11 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 6
nta00941 Flavonoid biosynthesis 2
nta00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
nta00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 3
sly00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00053 Ascorbate and aldarate metabolism 2
sly00562 Inositol phosphate metabolism 2
sly01240 Biosynthesis of cofactors 2
sly04070 Phosphatidylinositol signaling system 2
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00100 Steroid biosynthesis 2
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 2
ath04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 6
gma01230 Biosynthesis of amino acids 6
gma03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
gma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
gma01230 Biosynthesis of amino acids 2
gma04141 Protein processing in endoplasmic reticulum 2
gma00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 4
bra04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00966 Glucosinolate biosynthesis 4
bra01210 2-Oxocarboxylic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01230 Biosynthesis of amino acids 7
vvi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 6
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 3
vvi00190 Oxidative phosphorylation 2
vvi04145 Phagosome 2
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 4
ppo03050 Proteasome 4
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03060 Protein export 3
mtr01230 Biosynthesis of amino acids 2
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00020 Citrate cycle (TCA cycle) 6
mtr01200 Carbon metabolism 6
mtr01210 2-Oxocarboxylic acid metabolism 5
mtr04141 Protein processing in endoplasmic reticulum 4
mtr00785 Lipoic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03060 Protein export 2
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04130 SNARE interactions in vesicular transport 2
ghi03015 mRNA surveillance pathway 2
ghi04136 Autophagy - other 2
ghi04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00051 Fructose and mannose metabolism 2
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi00541 Biosynthesis of various nucleotide sugars 2
ghi01240 Biosynthesis of cofactors 2
ghi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04130 SNARE interactions in vesicular transport 2
ghi03015 mRNA surveillance pathway 2
ghi04136 Autophagy - other 2
ghi04382 Cornified envelope formation 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 5
cit00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00020 Citrate cycle (TCA cycle) 5
osa01200 Carbon metabolism 5
osa01210 2-Oxocarboxylic acid metabolism 5
osa01230 Biosynthesis of amino acids 4
osa00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 6
tae04120 Ubiquitin mediated proteolysis 3
tae04130 SNARE interactions in vesicular transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 3
tae00240 Pyrimidine metabolism 3
tae01232 Nucleotide metabolism 3
tae01240 Biosynthesis of cofactors 3
tae04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04146 Peroxisome 4
tae00400 Phenylalanine, tyrosine and tryptophan biosynthesis 4
tae01230 Biosynthesis of amino acids 4
tae00030 Pentose phosphate pathway 4
tae00480 Glutathione metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 5
hvu00010 Glycolysis / Gluconeogenesis 3
hvu00020 Citrate cycle (TCA cycle) 3
hvu00785 Lipoic acid metabolism 2
hvu01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04016 MAPK signaling pathway - plant 2
sbi00941 Flavonoid biosynthesis 2
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 4
bdi04145 Phagosome 2
bdi04517 IgSF CAM signaling 2
bdi04814 Motor proteins 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107785476 107831827 107824402 109119827 101266798 101266229 102583860 102588248 820668 826653 841802 100779109 100787572 100818291 117125894 103870020 100245327 100251410 100261591 7455039 18095398 25487066 11421672 11444764 107923716 107923717 107923718 106431497 102629091 102625912 102609458 4328858 107281429 100283708 103642930 123147556 123169819 123069239 123406978 123407427 123407665 8066099 110434929 8079530 100821818 100835921 100841044 5715955
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