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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107786772   psbP-like protein 1, chloroplastic 
 sly-u.5   101259227   psbP-like protein 1, chloroplastic 
 ath-u.5   PPL1   PsbP-like protein 1 
 gma-u.5   100789641   psbP-like protein 1, chloroplastic 
 gma-u.5   100305918   psbP-like protein 1, chloroplastic 
 vvi-u.5   PSBP2   putative oxygen evolving enhancer protein 
 ppo-u.5   7458603   psbP-like protein 1, chloroplastic 
 mtr-u.5   25497707   psbP-like protein 1, chloroplastic 
 osa-u.5   4345346   psbP-like protein 1, chloroplastic 
 osa-u.5   4348816   uncharacterized LOC4348816 
 osa-u.5   9268431   psbP-like protein 1, chloroplastic 
 zma-u.5   100281199   chloroplast oxygen-evolving complex/thylakoid lumenal 25.6kDa protein 

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Top 50 coexpressed genes to 107786772 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107786772 (nta-r.1 coexpression data)

CoexMap"107786772"


ntaLOC107786772 | Entrez gene ID : 107786772      
Species nta sly ath gma vvi ppo mtr osa zma sbi bra cre hvu cit bdi sot tae bna ghi
Paralog 1 1 1 2 1 1 1 3 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG nta00195 [list] [network] Photosynthesis (136 genes)
GO BP
GO:0015979 [list] [network] photosynthesis  (219 genes)  IEA  
GO CC
GO:0009654 [list] [network] photosystem II oxygen evolving complex  (48 genes)  IEA  
GO:0019898 [list] [network] extrinsic component of membrane  (48 genes)  IEA  
GO:0009523 [list] [network] photosystem II  (65 genes)  IEA  
GO MF
GO:0005509 [list] [network] calcium ion binding  (495 genes)  IEA  
Protein XP_016463766.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  mito 1,  pero 1  (predict for XP_016463766.2)
Subcellular
localization
TargetP
chlo 5  (predict for XP_016463766.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107786772

.
sly-u.5
for
101259227

.
ath-u.5
for
PPL1

.
gma-u.5
for
100789641

.
gma-u.5
for
100305918

.
vvi-u.5
for
PSBP2

.
ppo-u.5
for
7458603

.
mtr-u.5
for
25497707

.
osa-u.5
for
4345346

.
osa-u.5
for
4348816

.
osa-u.5
for
9268431

.
zma-u.5
for
100281199

.


Ortholog ID: 8055
Species ath gma gma sly osa osa zma vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol PPL1 LOC100789641 LOC100305918 LOC101259227 LOC4345346 LOC4348816 LOC100281199 PSBP2 LOC7458603 LOC25497707 LOC123095571 LOC123087420 LOC123446809 LOC107960084 LOC107904111 LOC106367527 LOC106445351 CHLRE_12g509050v5 LOC8085721 LOC102585358 LOC102629780 LOC100840391 LOC107786772 LOC107774757
Function* PsbP-like protein 1 psbP-like protein 1, chloroplastic psbP-like protein 1, chloroplastic psbP-like protein 1, chloroplastic psbP-like protein 1, chloroplastic uncharacterized LOC4348816 chloroplast oxygen-evolving complex/thylakoid lumenal 25.6kDa protein putative oxygen evolving enhancer protein psbP-like protein 1, chloroplastic psbP-like protein 1, chloroplastic psbP-like protein 1, chloroplastic psbP-like protein 1, chloroplastic psbP-like protein 1, chloroplastic psbP-like protein 1, chloroplastic psbP-like protein 1, chloroplastic psbP-like protein 1, chloroplastic psbP-like protein 1, chloroplastic uncharacterized protein psbP-like protein 1, chloroplastic psbP-like protein 1, chloroplastic psbP-like protein 1, chloroplastic psbP-like protein 1, chloroplastic psbP-like protein 1, chloroplastic psbP-like protein 1, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 4
ath00710 Carbon fixation by Calvin cycle 2
ath00260 Glycine, serine and threonine metabolism 2
ath00630 Glyoxylate and dicarboxylate metabolism 2
ath00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 2
gma00260 Glycine, serine and threonine metabolism 2
gma00630 Glyoxylate and dicarboxylate metabolism 2
gma00670 One carbon pool by folate 2
gma00785 Lipoic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 6
gma00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
gma01240 Biosynthesis of cofactors 2
gma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 3
sly00710 Carbon fixation by Calvin cycle 2
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 4
osa00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00710 Carbon fixation by Calvin cycle 3
vvi01200 Carbon metabolism 3
vvi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00710 Carbon fixation by Calvin cycle 6
ppo01200 Carbon metabolism 6
ppo00195 Photosynthesis 4
ppo00010 Glycolysis / Gluconeogenesis 2
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 5
mtr00710 Carbon fixation by Calvin cycle 4
mtr00195 Photosynthesis 4
mtr00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00196 Photosynthesis - antenna proteins 3
tae00195 Photosynthesis 3
tae01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 4
tae00196 Photosynthesis - antenna proteins 2
tae00740 Riboflavin metabolism 2
tae00790 Folate biosynthesis 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 7
hvu00710 Carbon fixation by Calvin cycle 4
hvu00195 Photosynthesis 4
hvu00630 Glyoxylate and dicarboxylate metabolism 4
hvu00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00030 Pentose phosphate pathway 2
ghi00051 Fructose and mannose metabolism 2
ghi00710 Carbon fixation by Calvin cycle 2
ghi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 7
sot01200 Carbon metabolism 4
sot00710 Carbon fixation by Calvin cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 3
cit00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00630 Glyoxylate and dicarboxylate metabolism 7
bdi01200 Carbon metabolism 7
bdi00710 Carbon fixation by Calvin cycle 5
bdi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 9
nta00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 6
nta00195 Photosynthesis 2
nta00620 Pyruvate metabolism 2
nta00860 Porphyrin metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824699 100789641 100305918 101259227 4345346 4348816 100281199 100259776 7458603 25497707 123095571 123087420 123446809 107960084 107904111 106367527 106445351 5716532 8085721 102585358 102629780 100840391 107786772 107774757
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