ATTED-II : GeneCoexpression result

Species	Gene	Description
sly-u.5	101257027	transcription factor bHLH113
ath-u.5	AT3G19500	basic helix-loop-helix (bHLH) DNA-binding superfamily protein
gma-u.5	100809317	transcription factor bHLH113
gma-u.5	100809107	transcription factor bHLH113
vvi-u.5	100249018	transcription factor bHLH113
mtr-u.5	25485380	transcription factor bHLH113

functional annotation

KEGG

GO BP

GO:0006357 [list] [network] regulation of transcription by RNA polymerase II

(712 genes)

IEA

GO CC

GO:0005634 [list] [network] nucleus

(4980 genes)

IEA

GO MF

GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding	(297 genes)	IEA
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific	(394 genes)	IEA
GO:0046983 [list] [network] protein dimerization activity	(1129 genes)	IEA

Protein

XP_016465349.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 7, mito 1, chlo 1, cyto 1, cyto_mito 1, mito_plas 1

(predict for XP_016465349.1)

Subcellular
localization
TargetP

other 9

(predict for XP_016465349.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sly-u.5 for 101257027	ath-u.5 for AT3G19500	gma-u.5 for 100809317	gma-u.5 for 100809107	vvi-u.5 for 100249018	mtr-u.5 for 25485380

Ortholog ID: 11682

Species

sly

ath

gma

bra

vvi

mtr

ghi

bna

cit

Symbol

Function^*

transcription factor bHLH113

basic helix-loop-helix (bHLH) DNA-binding superfamily protein

transcription factor bHLH113

transcription factor bHLH113-like

transcription factor bHLH113

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath01210	2-Oxocarboxylic acid metabolism	8
ath00966	Glucosinolate biosynthesis	7
ath00290	Valine, leucine and isoleucine biosynthesis	3
ath00270	Cysteine and methionine metabolism	2
ath01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04814	Motor proteins	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00061	Fatty acid biosynthesis	4
ghi01040	Biosynthesis of unsaturated fatty acids	4
ghi01212	Fatty acid metabolism	4
ghi04141	Protein processing in endoplasmic reticulum	3
ghi00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00061	Fatty acid biosynthesis	4
ghi01040	Biosynthesis of unsaturated fatty acids	4
ghi01212	Fatty acid metabolism	4
ghi04141	Protein processing in endoplasmic reticulum	2
ghi00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04075	Plant hormone signal transduction	2
cit00520	Amino sugar and nucleotide sugar metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

101257027

821484

100809317

100809107

103869450

100249018

25485380

107894306

107918903

125609623

102624532


Species	sly	ath	gma	vvi	mtr	bdi	hvu	bra	cit	bna	ppo	sbi	ghi	osa	sot	nta	cre	tae	zma
Paralog	1	1	2	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 101257027 (sly-u.5 coexpression data)

Top 50 enrichment test to 101257027 (sly-u.5 coexpression data)

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 101257027 (sly-u.5 coexpression data)

Top 50 enrichment test to 101257027 (sly-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**