ATTED-II : GeneCoexpression result

Species	Gene	Description
nta-r.1	107789563	uncharacterized LOC107789563
sly-u.5	101251666	uncharacterized LOC101251666
sly-u.5	101244847	ring finger domain-containing protein
ath-u.5	AT1G17970	RING/U-box superfamily protein
ath-u.5	AT1G73760	RING/U-box superfamily protein
gma-u.5	100818517	uncharacterized LOC100818517
gma-u.5	100807785	uncharacterized LOC100807785
gma-u.5	100788837	uncharacterized LOC100788837
vvi-u.5	100252628	uncharacterized LOC100252628
ppo-u.5	7475652	uncharacterized LOC7475652
ppo-u.5	7486755	uncharacterized LOC7486755
mtr-u.5	11426047	uncharacterized LOC11426047
mtr-u.5	11411170	uncharacterized LOC11411170
osa-u.5	9269271	uncharacterized LOC9269271
osa-u.5	4339524	uncharacterized LOC4339524
zma-u.5	100281993	uncharacterized LOC100281993
zma-u.5	100285775	protein binding protein
zma-u.5	103630690	E3 ubiquitin-protein ligase Arkadia

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0061630 [list] [network] ubiquitin protein ligase activity

(368 genes)

IEA

Protein

XP_016466887.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 7, mito 1, plas 1, golg_plas 1

(predict for XP_016466887.1)

Subcellular
localization
TargetP

chlo 8

(predict for XP_016466887.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	nta-r.1 for 107789563	sly-u.5 for 101251666	sly-u.5 for 101244847	ath-u.5 for AT1G17970	ath-u.5 for AT1G73760	gma-u.5 for 100818517	gma-u.5 for 100807785	gma-u.5 for 100788837	vvi-u.5 for 100252628	ppo-u.5 for 7475652	ppo-u.5 for 7486755	mtr-u.5 for 11426047	mtr-u.5 for 11411170	osa-u.5 for 9269271	osa-u.5 for 4339524	zma-u.5 for 100281993	zma-u.5 for 100285775	zma-u.5 for 103630690

Ortholog

Ortholog ID: 3162

Species

nta

sly

sot

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC107826725

uncharacterized LOC107825792

uncharacterized LOC101251666

ring finger domain-containing protein

uncharacterized LOC102601442

RING/U-box superfamily protein

uncharacterized LOC100818517

uncharacterized LOC100788837

uncharacterized LOC103835929

E3 ubiquitin-protein ligase MBR1

uncharacterized LOC100245764

uncharacterized LOC7486755

uncharacterized LOC7475652

uncharacterized LOC11411170

uncharacterized LOC11426047

probable E3 ubiquitin-protein ligase RHG1A

uncharacterized LOC111207187

E3 ubiquitin-protein ligase MBR2

uncharacterized LOC102630351

uncharacterized LOC9269271

uncharacterized LOC4339524

protein binding protein

E3 ubiquitin-protein ligase Arkadia

E3 ubiquitin-protein ligase MBR2

potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4

uncharacterized LOC123449190

potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4-like

uncharacterized LOC8074552

uncharacterized LOC8063097

uncharacterized LOC100824389

uncharacterized LOC100839508

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00330	Arginine and proline metabolism	2
nta00360	Phenylalanine metabolism	2
nta00380	Tryptophan metabolism	2
nta04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	2
nta04712	Circadian rhythm - plant	2
nta00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04136	Autophagy - other	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04712	Circadian rhythm - plant	2
ath00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04016	MAPK signaling pathway - plant	2
gma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	4
gma00270	Cysteine and methionine metabolism	3
gma00543	Exopolysaccharide biosynthesis	3
gma00920	Sulfur metabolism	3
gma01200	Carbon metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	3
bra04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04016	MAPK signaling pathway - plant	2
bra04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00071	Fatty acid degradation	5
ghi00592	alpha-Linolenic acid metabolism	5
ghi01212	Fatty acid metabolism	5
ghi00410	beta-Alanine metabolism	4
ghi00640	Propanoate metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00410	beta-Alanine metabolism	8
ghi00640	Propanoate metabolism	8
ghi00071	Fatty acid degradation	7
ghi01212	Fatty acid metabolism	7
ghi01200	Carbon metabolism	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	2
zma04141	Protein processing in endoplasmic reticulum	2
zma04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00592	alpha-Linolenic acid metabolism	2
sbi00591	Linoleic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04075	Plant hormone signal transduction	4
sbi00190	Oxidative phosphorylation	2

Expression

Expression pattern

Entrez Gene ID^*

107826725

107825792

101251666

101244847

102601442

843711

838377

100818517

100788837

103835929

103831852

100245764

7486755

7475652

11411170

11426047

107891981

107888783

111207187

106382952

102630351

9269271

4339524

100285775

103630690

123078922

123070510

123449190

123444164

8074552

8063097

100824389

100839508

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 107789563 (nta-r.1 coexpression data)

Top 50 enrichment test to 107789563 (nta-r.1 coexpression data)


Species	nta	sly	ath	gma	vvi	ppo	mtr	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	cre	tae
Paralog	1	2	2	3	1	2	2	2	3	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107789563 (nta-r.1 coexpression data)

Top 50 enrichment test to 107789563 (nta-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**