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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107789959   pentatricopeptide repeat-containing protein At1g74850, chloroplastic 
 sly-u.5   101262199   pentatricopeptide repeat-containing protein At1g74850, chloroplastic 
 ath-u.5   PTAC2   plastid transcriptionally active 2 
 gma-u.5   100801366   pentatricopeptide repeat-containing protein At1g74850, chloroplastic 
 gma-u.5   100797731   pentatricopeptide repeat-containing protein At1g74850, chloroplastic 
 vvi-u.5   100251853   pentatricopeptide repeat-containing protein At1g74850, chloroplastic 
 ppo-u.5   7462533   pentatricopeptide repeat-containing protein At1g74850, chloroplastic 
 mtr-u.5   25493780   pentatricopeptide repeat-containing protein At1g74850, chloroplastic 
 osa-u.5   4334623   pentatricopeptide repeat-containing protein At1g74850, chloroplastic 
 zma-u.5   103633614   pentatricopeptide repeat-containing protein At1g74850, chloroplastic-like 

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Top 50 coexpressed genes to 107789959 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107789959 (nta-r.1 coexpression data)

CoexMap"107789959"


ntaLOC107789959 | Entrez gene ID : 107789959    
Species nta sly ath gma vvi ppo mtr osa zma bdi hvu bra cit bna sbi ghi sot cre tae
Paralog 1 1 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_016467322.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_016467322.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_016467322.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107789959
sly-u.5
for
101262199
ath-u.5
for
PTAC2
gma-u.5
for
100801366
gma-u.5
for
100797731
vvi-u.5
for
100251853
ppo-u.5
for
7462533
mtr-u.5
for
25493780
osa-u.5
for
4334623
zma-u.5
for
103633614


Ortholog ID: 11132
Species nta nta sly sot ath gma gma bra vvi ppo mtr ghi ghi bna bna cit osa zma tae tae hvu sbi bdi
Symbol LOC107789959 LOC107803026 LOC101262199 LOC102602805 PTAC2 LOC100797731 LOC100801366 LOC103831944 LOC100251853 LOC7462533 LOC25493780 LOC107941546 LOC107954105 LOC106404446 LOC106354541 LOC102619593 LOC4334623 LOC103633614 LOC123114053 LOC123123542 LOC123453103 LOC8057352 LOC100830599
Function* pentatricopeptide repeat-containing protein At1g74850, chloroplastic pentatricopeptide repeat-containing protein At1g74850, chloroplastic pentatricopeptide repeat-containing protein At1g74850, chloroplastic pentatricopeptide repeat-containing protein At1g74850, chloroplastic plastid transcriptionally active 2 pentatricopeptide repeat-containing protein At1g74850, chloroplastic pentatricopeptide repeat-containing protein At1g74850, chloroplastic pentatricopeptide repeat-containing protein At1g74850, chloroplastic pentatricopeptide repeat-containing protein At1g74850, chloroplastic pentatricopeptide repeat-containing protein At1g74850, chloroplastic pentatricopeptide repeat-containing protein At1g74850, chloroplastic pentatricopeptide repeat-containing protein At1g74850, chloroplastic pentatricopeptide repeat-containing protein At1g74850, chloroplastic pentatricopeptide repeat-containing protein At1g74850, chloroplastic pentatricopeptide repeat-containing protein At1g74850, chloroplastic pentatricopeptide repeat-containing protein At1g74850, chloroplastic pentatricopeptide repeat-containing protein At1g74850, chloroplastic pentatricopeptide repeat-containing protein At1g74850, chloroplastic-like pentatricopeptide repeat-containing protein At1g74850, chloroplastic pentatricopeptide repeat-containing protein At1g74850, chloroplastic pentatricopeptide repeat-containing protein At1g74850, chloroplastic pentatricopeptide repeat-containing protein At1g74850, chloroplastic pentatricopeptide repeat-containing protein At1g74850, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
nta04141 Protein processing in endoplasmic reticulum 3
nta04144 Endocytosis 3
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
nta04141 Protein processing in endoplasmic reticulum 3
nta04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 2
sot01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00260 Glycine, serine and threonine metabolism 2
tae00270 Cysteine and methionine metabolism 2
tae01200 Carbon metabolism 2
tae01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107789959 107803026 101262199 102602805 843824 100797731 100801366 103831944 100251853 7462533 25493780 107941546 107954105 106404446 106354541 102619593 4334623 103633614 123114053 123123542 123453103 8057352 100830599
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