ATTED-II : GeneCoexpression result

Species	Gene	Description
nta-r.1	107792711	uncharacterized LOC107792711
sly-u.5	101245078	uncharacterized LOC101245078
ath-u.5	AT5G55040	DNA-binding bromodomain-containing protein
gma-u.5	100799986	uncharacterized LOC100799986
gma-u.5	100799455	uncharacterized LOC100799455
vvi-u.5	100267501	uncharacterized LOC100267501
mtr-u.5	11428851	uncharacterized LOC11428851
mtr-u.5	11428264	uncharacterized LOC11428264

functional annotation

KEGG

nta03082 [list] [network] ATP-dependent chromatin remodeling (124 genes)

GO BP

GO CC

GO MF

GO:0005515 [list] [network] protein binding

(7685 genes)

IEA

Protein

XP_016470431.2 [sequence] [blastp]

Subcellular
localization
wolf

nucl 7, plas 1, golg_plas 1, cyto 1, cysk 1

(predict for XP_016470431.2)

Subcellular
localization
TargetP

other 4, mito 3

(predict for XP_016470431.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	nta-r.1 for 107792711	sly-u.5 for 101245078	ath-u.5 for AT5G55040	gma-u.5 for 100799986	gma-u.5 for 100799455	vvi-u.5 for 100267501	mtr-u.5 for 11428851	mtr-u.5 for 11428264

Ortholog ID: 12940

Species

nta

sly

sot

ath

gma

vvi

mtr

ghi

cit

cre

Symbol

Function^*

uncharacterized LOC107792711

uncharacterized LOC107794267

uncharacterized LOC101245078

uncharacterized LOC102606294

DNA-binding bromodomain-containing protein

uncharacterized LOC100792844

uncharacterized LOC100793896

uncharacterized LOC100267501

uncharacterized LOC11428264

uncharacterized LOC11428851

bromodomain-containing protein 9

uncharacterized LOC102624873

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00600	Sphingolipid metabolism	2
nta04142	Lysosome	2
nta04144	Endocytosis	2
nta05100	Bacterial invasion of epithelial cells	2
nta03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00600	Sphingolipid metabolism	2
nta04142	Lysosome	2
nta04144	Endocytosis	2
nta05100	Bacterial invasion of epithelial cells	2
nta03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03015	mRNA surveillance pathway	3
sot03082	ATP-dependent chromatin remodeling	2
sot04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03082	ATP-dependent chromatin remodeling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03082	ATP-dependent chromatin remodeling	4
gma03040	Spliceosome	4
gma03013	Nucleocytoplasmic transport	2
gma03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	2
ghi03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03040	Spliceosome	2
cre03018	RNA degradation	2

Expression

Expression pattern

Entrez Gene ID^*

107792711

107794267

101245078

102606294

835595

100792844

100793896

100267501

11428264

11428851

121227846

107932763

102624873

5717802

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 107792711 (nta-r.1 coexpression data)

Top 50 enrichment test to 107792711 (nta-r.1 coexpression data)


Species	nta	sly	ath	gma	vvi	mtr	hvu	zma	bna	cit	bra	ghi	osa	ppo	sbi	bdi	tae	cre	sot
Paralog	1	1	1	2	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107792711 (nta-r.1 coexpression data)

Top 50 enrichment test to 107792711 (nta-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**