ATTED-II : GeneCoexpression result

Species	Gene	Description
nta-r.1	107795803	protein CHROMATIN REMODELING 5
sly-u.5	101252967	protein CHROMATIN REMODELING 5
ath-u.5	CHR5	chromatin remodeling 5
gma-u.5	100808039	protein CHROMATIN REMODELING 5
gma-u.5	100792398	protein CHROMATIN REMODELING 5
vvi-u.5	100261898	protein CHROMATIN REMODELING 5
ppo-u.5	7467397	protein CHROMATIN REMODELING 5
ppo-u.5	7461648	protein CHROMATIN REMODELING 5
mtr-u.5	11425259	protein CHROMATIN REMODELING 5
mtr-u.5	11435417	protein CHROMATIN REMODELING 5
osa-u.5	4344175	protein CHROMATIN REMODELING 5
zma-u.5	103647912	protein CHROMATIN REMODELING 5
zma-u.5	103633530	protein CHROMATIN REMODELING 5

functional annotation

KEGG

GO BP

GO:0034728 [list] [network] nucleosome organization

(79 genes)

IEA

GO CC

GO:0000785 [list] [network] chromatin	(386 genes)	IEA
GO:0005634 [list] [network] nucleus	(4980 genes)	IEA

GO MF

GO:0140658 [list] [network] ATP-dependent chromatin remodeler activity	(14 genes)	IEA
GO:0042393 [list] [network] histone binding	(98 genes)	IEA
GO:0003682 [list] [network] chromatin binding	(255 genes)	IEA
GO:0016887 [list] [network] ATP hydrolysis activity	(824 genes)	IEA
GO:0003677 [list] [network] DNA binding	(3714 genes)	IEA
GO:0005524 [list] [network] ATP binding	(3859 genes)	IEA

Protein

XP_016473989.1 [sequence] [blastp]
XP_016473990.1 [sequence] [blastp]
XP_016473992.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, chlo 3, cyto_nucl 3	(predict for XP_016473989.1)
nucl 6, chlo 3, cyto_nucl 3	(predict for XP_016473990.1)
cyto 6, nucl 4	(predict for XP_016473992.1)

Subcellular
localization
TargetP

other 6, mito 6	(predict for XP_016473989.1)
other 6, mito 6	(predict for XP_016473990.1)
other 9	(predict for XP_016473992.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	nta-r.1 for 107795803	sly-u.5 for 101252967	ath-u.5 for CHR5	gma-u.5 for 100808039	gma-u.5 for 100792398	vvi-u.5 for 100261898	ppo-u.5 for 7467397	ppo-u.5 for 7461648	mtr-u.5 for 11425259	mtr-u.5 for 11435417	osa-u.5 for 4344175	zma-u.5 for 103647912	zma-u.5 for 103633530

Ortholog ID: 8383

Species

nta

sly

sot

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

CHR5

Function^*

protein CHROMATIN REMODELING 5-like

protein CHROMATIN REMODELING 5

chromatin remodeling 5

protein CHROMATIN REMODELING 5

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04120	Ubiquitin mediated proteolysis	3
ath03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03022	Basal transcription factors	2
gma03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03013	Nucleocytoplasmic transport	2
gma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03013	Nucleocytoplasmic transport	3
bra03015	mRNA surveillance pathway	2
bra03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	2
vvi03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00310	Lysine degradation	2
ppo03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00562	Inositol phosphate metabolism	2
ghi04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03022	Basal transcription factors	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03022	Basal transcription factors	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03420	Nucleotide excision repair	2
cit00562	Inositol phosphate metabolism	2
cit04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03018	RNA degradation	4
tae03015	mRNA surveillance pathway	2
tae03020	RNA polymerase	2
tae03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	2
sbi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03040	Spliceosome	4
bdi03013	Nucleocytoplasmic transport	3

Expression

Expression pattern

Entrez Gene ID^*

107761494

107795803

101252967

102593358

815823

100792398

100808039

103837640

100261898

7461648

7467397

11435417

11425259

107939460

107889299

106410321

106366361

102610451

4344175

103633530

103647912

123051727

123424887

8072256

100826108

5728805

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 107795803 (nta-r.1 coexpression data)

Top 50 enrichment test to 107795803 (nta-r.1 coexpression data)


Species	nta	sly	ath	gma	vvi	ppo	mtr	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	cre	tae
Paralog	1	1	1	2	1	2	2	1	2	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107795803 (nta-r.1 coexpression data)

Top 50 enrichment test to 107795803 (nta-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**