ATTED-II : GeneCoexpression result

Species	Gene	Description
sot-r.1	102583703	cell differentiation protein RCD1 homolog
sot-r.1	102584817	cell differentiation protein RCD1 homolog

functional annotation

KEGG

nta03018 [list] [network] RNA degradation (211 genes)

GO BP

GO:0006402 [list] [network] mRNA catabolic process

(141 genes)

IEA

GO CC

GO:0030014 [list] [network] CCR4-NOT complex

(48 genes)

IEA

GO MF

Protein

XP_016474241.2 [sequence] [blastp]

Subcellular
localization
wolf

extr 3, vacu 3, chlo 1, nucl 1, plas 1, E.R. 1, golg 1, chlo_mito 1, nucl_plas 1, golg_plas 1, E.R._plas 1

(predict for XP_016474241.2)

Subcellular
localization
TargetP

mito 4, other 4

(predict for XP_016474241.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sot-r.1 for 102583703	sot-r.1 for 102584817

Ortholog ID: 22027

Species

sot

Symbol

LOC102583703

LOC102584817

Function^*

cell differentiation protein RCD1 homolog

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03018	RNA degradation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03018	RNA degradation	4

Expression

Expression pattern

Entrez Gene ID^*

102583703

102584817


Species	sot	osa	sly	cit	ath	bna	ppo	ghi	bdi	sbi	gma	mtr	bra	tae	hvu	vvi	zma	cre	nta
Paralog	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 102583703 (sot-r.1 coexpression data)

Top 50 enrichment test to 102583703 (sot-r.1 coexpression data)

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 102583703 (sot-r.1 coexpression data)

Top 50 enrichment test to 102583703 (sot-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**