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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101263971   pentatricopeptide repeat-containing protein At1g06143 
 ath-u.5   AT1G06143   basic helix loop helix DNA-binding superfamily protein 
 vvi-u.5   100264065   pentatricopeptide repeat-containing protein At1g06143 
 mtr-u.5   25498248   pentatricopeptide repeat-containing protein At1g06143 

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Top 50 coexpressed genes to 101263971 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101263971 (sly-u.5 coexpression data)

CoexMap"107801893"


ntaLOC107801893 | Entrez gene ID : 107801893      
Species sly ath vvi mtr bdi hvu bra cit gma bna ppo sbi ghi osa sot nta cre tae zma
Paralog 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (732 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (2607 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_016480787.1 [sequence] [blastp]
XP_016480788.1 [sequence] [blastp]
XP_075081784.1 [sequence] [blastp]
XP_075081785.1 [sequence] [blastp]
XP_075081786.1 [sequence] [blastp]
XP_075081787.1 [sequence] [blastp]
XP_075081788.1 [sequence] [blastp]
XP_075081790.1 [sequence] [blastp]
XP_075081791.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  cyto 2,  nucl 1,  mito 1,  vacu 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_016480787.1)
chlo 5,  cyto 2,  nucl 1,  mito 1,  vacu 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_016480788.1)
chlo 5,  cyto 2,  nucl 1,  mito 1,  vacu 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_075081784.1)
chlo 5,  cyto 2,  nucl 1,  mito 1,  vacu 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_075081785.1)
chlo 5,  cyto 2,  nucl 1,  mito 1,  vacu 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_075081786.1)
chlo 5,  cyto 2,  nucl 1,  mito 1,  vacu 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_075081787.1)
chlo 5,  cyto 2,  nucl 1,  mito 1,  vacu 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_075081788.1)
chlo 5,  cyto 2,  nucl 1,  mito 1,  vacu 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_075081790.1)
chlo 5,  cyto 2,  nucl 1,  mito 1,  vacu 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_075081791.1)
Subcellular
localization
TargetP
scret 4  (predict for XP_016480787.1)
scret 4  (predict for XP_016480788.1)
scret 4  (predict for XP_075081784.1)
scret 4  (predict for XP_075081785.1)
scret 4  (predict for XP_075081786.1)
scret 4  (predict for XP_075081787.1)
scret 4  (predict for XP_075081788.1)
scret 4  (predict for XP_075081790.1)
scret 4  (predict for XP_075081791.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101263971
ath-u.5
for
AT1G06143
vvi-u.5
for
100264065
mtr-u.5
for
25498248


Ortholog ID: 13238
Species sly ath bra vvi mtr ghi ghi bna
Symbol LOC101263971 AT1G06143 LOC103843567 LOC100264065 LOC25498248 LOC107915076 LOC121204953 LOC106419844
Function* pentatricopeptide repeat-containing protein At1g06143 basic helix loop helix DNA-binding superfamily protein pentatricopeptide repeat-containing protein At1g06143 pentatricopeptide repeat-containing protein At1g06143 pentatricopeptide repeat-containing protein At1g06143 pentatricopeptide repeat-containing protein At1g06143 pentatricopeptide repeat-containing protein At1g06143 pentatricopeptide repeat-containing protein At1g06143-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101263971 28716441 103843567 100264065 25498248 107915076 121204953 106419844
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