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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107802422   DNA mismatch repair protein MSH4 
 sly-u.5   101263336   DNA mismatch repair protein MSH4 
 gma-u.5   100815919   DNA mismatch repair protein MSH4 
 mtr-u.5   11436948   DNA mismatch repair protein MSH4 
 osa-u.5   9266513   DNA mismatch repair protein MSH4 
 zma-u.5   103647676   DNA mismatch repair protein MSH4 

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Top 50 coexpressed genes to 107802422 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107802422 (nta-r.1 coexpression data)

CoexMap"107802422"


ntaLOC107802422 | Entrez gene ID : 107802422      
Species nta sly gma mtr osa zma bdi hvu bra vvi cit bna ath ppo sbi ghi sot cre tae
Paralog 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006298 [list] [network] mismatch repair  (35 genes)  IEA  
GO:0007131 [list] [network] reciprocal meiotic recombination  (67 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (4980 genes)  IEA  
GO MF
GO:0030983 [list] [network] mismatched DNA binding  (31 genes)  IEA  
GO:0140664 [list] [network] ATP-dependent DNA damage sensor activity  (48 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (3859 genes)  IEA  
Protein XP_016481411.2 [sequence] [blastp]
XP_016481412.2 [sequence] [blastp]
XP_016481413.2 [sequence] [blastp]
XP_016481414.2 [sequence] [blastp]
XP_075086585.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  nucl 2,  cysk_nucl 1,  plas 1,  cyto 1,  mito 1,  extr 1,  vacu 1,  golg_plas 1,  E.R._plas 1  (predict for XP_016481411.2)
chlo 3,  nucl 2,  cysk_nucl 1,  cyto 1,  mito 1,  plas 1,  extr 1,  vacu 1,  E.R. 1,  E.R._vacu 1,  E.R._plas 1,  mito_plas 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_016481412.2)
chlo 3,  nucl 2,  cysk_nucl 1,  cyto 1,  mito 1,  plas 1,  extr 1,  vacu 1,  E.R. 1,  E.R._vacu 1,  E.R._plas 1,  mito_plas 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_016481413.2)
chlo 3,  nucl 2,  cysk_nucl 1,  extr 1,  cyto 1,  mito 1,  plas 1,  vacu 1,  mito_plas 1,  cyto_plas 1  (predict for XP_016481414.2)
chlo 3,  nucl 2,  extr 1,  cyto_nucl 1,  nucl_plas 1  (predict for XP_075086585.1)
Subcellular
localization
TargetP
other 8  (predict for XP_016481411.2)
other 8  (predict for XP_016481412.2)
other 8  (predict for XP_016481413.2)
scret 6  (predict for XP_016481414.2)
other 8  (predict for XP_075086585.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107802422
sly-u.5
for
101263336
gma-u.5
for
100815919
mtr-u.5
for
11436948
osa-u.5
for
9266513
zma-u.5
for
103647676


Ortholog ID: 10192
Species nta nta sly sot gma bra mtr ghi ghi bna cit osa zma tae tae hvu bdi cre
Symbol LOC107788296 LOC107802422 LOC101263336 LOC102599967 LOC100815919 LOC103834012 LOC11436948 LOC107944387 LOC107886066 LOC106381657 LOC102623441 LOC9266513 LOC103647676 LOC123187979 LOC123052118 LOC123425351 LOC100822001 CHLRE_16g692550v5
Function* DNA mismatch repair protein MSH4-like DNA mismatch repair protein MSH4 DNA mismatch repair protein MSH4 DNA mismatch repair protein MSH4 DNA mismatch repair protein MSH4 DNA mismatch repair protein MSH4 DNA mismatch repair protein MSH4 DNA mismatch repair protein MSH4 DNA mismatch repair protein MSH4 DNA mismatch repair protein MSH4 DNA mismatch repair protein MSH4 DNA mismatch repair protein MSH4 DNA mismatch repair protein MSH4 DNA mismatch repair protein MSH4 peroxisome biogenesis factor 10 DNA mismatch repair protein MSH4 DNA mismatch repair protein MSH4 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03430 Mismatch repair 2
nta00260 Glycine, serine and threonine metabolism 2
nta00270 Cysteine and methionine metabolism 2
nta01200 Carbon metabolism 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03430 Mismatch repair 2
gma03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 4
ghi04144 Endocytosis 2
ghi00220 Arginine biosynthesis 2
ghi00250 Alanine, aspartate and glutamate metabolism 2
ghi00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 2
ghi04144 Endocytosis 2
ghi00220 Arginine biosynthesis 2
ghi00250 Alanine, aspartate and glutamate metabolism 2
ghi00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04814 Motor proteins 3
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00564 Glycerophospholipid metabolism 2
cit00561 Glycerolipid metabolism 2
cit00740 Riboflavin metabolism 2
cit04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 4
tae03040 Spliceosome 3
tae04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107788296 107802422 101263336 102599967 100815919 103834012 11436948 107944387 107886066 106381657 102623441 9266513 103647676 123187979 123052118 123425351 100822001 5724848
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