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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107807743   uncharacterized LOC107807743 
 sly-u.5   101256220   uncharacterized LOC101256220 
 ath-u.5   AT1G04790   RING/U-box superfamily protein 
 gma-u.5   100796218   E3 ubiquitin-protein ligase RLIM 
 gma-u.5   100789823   uncharacterized LOC100789823 
 vvi-u.5   100247656   uncharacterized LOC100247656 
 ppo-u.5   7493196   uncharacterized LOC7493196 
 mtr-u.5   25483106   E3 ubiquitin-protein ligase RNF12-A 
 osa-u.5   4336379   uncharacterized LOC4336379 
 zma-u.5   103164614   Putative RING zinc finger domain superfamily protein 

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Top 50 coexpressed genes to 107807743 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107807743 (nta-r.1 coexpression data)

CoexMap"107807743"


ntaLOC107807743 | Entrez gene ID : 107807743      
Species nta sly ath gma vvi ppo mtr osa zma bdi hvu bra cit bna sbi ghi sot cre tae
Paralog 1 1 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (520 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (4980 genes)  IEA  
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (368 genes)  IEA  
Protein XP_016487667.1 [sequence] [blastp]
XP_016487668.1 [sequence] [blastp]
XP_016487669.1 [sequence] [blastp]
XP_016487670.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 4,  cyto 1,  mito 1  (predict for XP_016487667.1)
nucl 9  (predict for XP_016487668.1)
nucl 9  (predict for XP_016487669.1)
nucl 9  (predict for XP_016487670.1)
Subcellular
localization
TargetP
other 4,  mito 3  (predict for XP_016487667.1)
other 8  (predict for XP_016487668.1)
other 8  (predict for XP_016487669.1)
other 8  (predict for XP_016487670.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107807743
sly-u.5
for
101256220
ath-u.5
for
AT1G04790
gma-u.5
for
100796218
gma-u.5
for
100789823
vvi-u.5
for
100247656
ppo-u.5
for
7493196
mtr-u.5
for
25483106
osa-u.5
for
4336379
zma-u.5
for
103164614


Ortholog ID: 8260
Species nta nta sly sot ath gma gma bra vvi ppo mtr ghi ghi bna bna cit osa zma tae tae hvu sbi bdi cre
Symbol LOC107824910 LOC107807743 LOC101256220 LOC102579041 AT1G04790 LOC100796218 LOC100789823 LOC103844217 LOC100247656 LOC7493196 LOC25483106 LOC107915058 LOC107957080 LOC106401416 LOC106370977 LOC102611427 LOC4336379 LOC103164614 LOC123189911 LOC123054023 LOC123427226 LOC8064467 LOC100837137 CHLRE_01g051700v5
Function* uncharacterized LOC107824910 uncharacterized LOC107807743 uncharacterized LOC101256220 E3 ubiquitin-protein ligase RNF6 RING/U-box superfamily protein E3 ubiquitin-protein ligase RLIM uncharacterized LOC100789823 zinc finger CCCH domain-containing protein 13 uncharacterized LOC100247656 uncharacterized LOC7493196 E3 ubiquitin-protein ligase RNF12-A uncharacterized LOC107915058 uncharacterized LOC107957080 E3 ubiquitin-protein ligase RLIM zinc finger CCCH domain-containing protein 13 uncharacterized LOC102611427 uncharacterized LOC4336379 Putative RING zinc finger domain superfamily protein E3 ubiquitin-protein ligase RNF12 uncharacterized LOC123054023 E3 ubiquitin-protein ligase RNF12-like uncharacterized LOC8064467 uncharacterized LOC100837137 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 4
nta03250 Viral life cycle - HIV-1 4
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 4
nta03250 Viral life cycle - HIV-1 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03082 ATP-dependent chromatin remodeling 2
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 3
ppo03083 Polycomb repressive complex 2
ppo03250 Viral life cycle - HIV-1 2
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
mtr04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00520 Amino sugar and nucleotide sugar metabolism 4
ghi00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 3
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
cit00562 Inositol phosphate metabolism 2
cit04070 Phosphatidylinositol signaling system 2
cit04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107824910 107807743 101256220 102579041 839412 100796218 100789823 103844217 100247656 7493196 25483106 107915058 107957080 106401416 106370977 102611427 4336379 103164614 123189911 123054023 123427226 8064467 100837137 66052168
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