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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107809623   uncharacterized LOC107809623 
 sly-u.5   101246042   pentatricopeptide repeat-containing protein 
 ath-u.5   AT3G04760   Pentatricopeptide repeat (PPR-like) superfamily protein 
 gma-u.5   100812545   pentatricopeptide repeat-containing protein At3g04760, chloroplastic 
 gma-u.5   100806999   pentatricopeptide repeat-containing protein At3g04760, chloroplastic 
 gma-u.5   100798097   pentatricopeptide repeat-containing protein At3g04760, chloroplastic 
 vvi-u.5   100255274   pentatricopeptide repeat-containing protein At3g04760, chloroplastic 
 ppo-u.5   18104091   pentatricopeptide repeat-containing protein At3g04760, chloroplastic 
 ppo-u.5   18108177   pentatricopeptide repeat-containing protein At3g04760, chloroplastic 
 mtr-u.5   11413581   pentatricopeptide repeat-containing protein At3g04760, chloroplastic 

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Top 50 coexpressed genes to 107809623 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107809623 (nta-r.1 coexpression data)

CoexMap"107809623"


ntaLOC107809623 | Entrez gene ID : 107809623    
Species nta sly ath gma vvi ppo mtr bdi hvu bra cit bna sbi ghi osa sot cre tae zma
Paralog 1 1 1 3 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_016489768.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  chlo_mito 5,  mito 1  (predict for XP_016489768.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_016489768.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107809623
sly-u.5
for
101246042
ath-u.5
for
AT3G04760
gma-u.5
for
100812545
gma-u.5
for
100806999
gma-u.5
for
100798097
vvi-u.5
for
100255274
ppo-u.5
for
18104091
ppo-u.5
for
18108177
mtr-u.5
for
11413581


Ortholog ID: 12650
Species nta nta sly sot ath gma gma bra vvi ppo ppo mtr ghi ghi bna bna cit
Symbol LOC107809623 LOC107822701 LOC101246042 LOC102586548 AT3G04760 LOC100812545 LOC100806999 LOC103849142 LOC100255274 LOC18108177 LOC18104091 LOC11413581 LOC107926841 LOC107892830 LOC106427413 LOC106453085 LOC102607585
Function* uncharacterized LOC107809623 uncharacterized LOC107822701 pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At3g04760, chloroplastic Pentatricopeptide repeat (PPR-like) superfamily protein pentatricopeptide repeat-containing protein At3g04760, chloroplastic pentatricopeptide repeat-containing protein At3g04760, chloroplastic pentatricopeptide repeat-containing protein At3g04760, chloroplastic pentatricopeptide repeat-containing protein At3g04760, chloroplastic pentatricopeptide repeat-containing protein At3g04760, chloroplastic pentatricopeptide repeat-containing protein At3g04760, chloroplastic pentatricopeptide repeat-containing protein At3g04760, chloroplastic pentatricopeptide repeat-containing protein At3g04760, chloroplastic pentatricopeptide repeat-containing protein At3g04760, chloroplastic pentatricopeptide repeat-containing protein At3g04760, chloroplastic pentatricopeptide repeat-containing protein At3g04760, chloroplastic pentatricopeptide repeat-containing protein At3g04760, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 11
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
gma01240 Biosynthesis of cofactors 2
gma00053 Ascorbate and aldarate metabolism 2
gma00480 Glutathione metabolism 2
gma00460 Cyanoamino acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 8
mtr00860 Porphyrin metabolism 2
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00260 Glycine, serine and threonine metabolism 2
bna01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00260 Glycine, serine and threonine metabolism 2
bna01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107809623 107822701 101246042 102586548 819636 100812545 100806999 103849142 100255274 18108177 18104091 11413581 107926841 107892830 106427413 106453085 102607585
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